Salvia splendens (scarlet sage): 121808304
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Entry
121808304 CDS
T07627
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121808304
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
121808304
NCBI-ProteinID:
XP_042064650
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Position
6:32395617..32402331
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AA seq
675 aa
AA seq
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MGIPGGGCSVVWFRRDLRVEDNPALAAAMRAGAVVAVFVWAPEEEGHYFPGRVSRWWLKN
SLSHLDSSLRSLGTPLLTKRSTDSVSSLLEVIKSTGAAQLFFNHLYDPISLVRDHRVKEV
LTAEGIAVRSFNADLLYEPWEVLDQEGRPFNTFSGFWDRCLSMAYDPEAPLLPPKRIFPG
DVSRCNPDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFLNGPLIEYSKNRRKADSA
TTSFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSF
NHPYSHERPLLGHLKYFPWVVDEGYFKAWRQGRTGYSLVDAGMRELWATGWLHDRIRVVV
SSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGRAFDRLDNLQIEGYK
FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAEARLE
EALAHMWQQEGASQTAIENGMEEGLGDSSESIPIAFPPDTDMEMDNEPIRNNPPNAVIRR
YEDQMVPSMTSSFIRVADEETSVDLRSTGDDNRAEVPSNVNPVEELRRERLAQAIIQTGR
TNDGFLQSNFARGRRNSEDSTAESSSSTRRERDGGIVPVWSPSNSTYSDPFRGEDNSIST
SSSYLARHPQAHQLF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcccggaggtggatgtagtgtagtttggttcaggagagatctccgggtggaa
gataatccggcgctggcagcggcgatgagggcgggggcggtggtggctgtttttgtttgg
gcgccggaggaggaggggcactacttccctgggagggtctcgagatggtggctgaagaat
agtttatcacaccttgatagctctttgaggagccttggcactcccctcctcactaagaga
tccactgatagtgtttcttctcttcttgaagttatcaaatcgactggtgctgctcagctg
tttttcaaccatttatatgatcctatatcacttgtaagggatcaccgggtaaaggaagtc
ttgactgctgaaggcattgccgtccgttccttcaatgcagacttgctctatgaaccatgg
gaagttcttgaccaggaaggtcgaccattcaatacattctcaggattctgggacagatgc
ctcagtatggcgtatgatcctgaagctcctctcctcccgcctaagaggatttttcctggt
gatgtgtcaagatgcaatcctgacactttagtattcgaagatgagtcagagaaaggaagc
aatgcccttctcgctcgggcctggtcccctggctggagcaatgcagataaagccctaaca
accttcttaaatggacccctcatagagtactccaagaatcgtcgaaaggctgatagtgcc
acgacctcatttctatccccccatttgcattttggggaagtcagtgttcgtaaggttttc
catcttgttcgcattaagcaagttctttgggccaatgaaggtaacaaagcaggtgaagag
agtgtaaatttgttcctcaaaagtatagggctgagggagtattccagatacatgagtttc
aatcatccgtacagccatgaaaggccgttacttggccacctcaagtatttcccttgggtt
gtggacgagggctacttcaaggcatggagacaaggccggactggatattctctggtggat
gctggtatgagggagctatgggccactggatggctacatgatcggatacgtgttgtagtc
tcgagtttctttgtcaaggttttgcagctgccttggcgatggggaatgaagtacttctgg
gataccctgctggatgcagatcttgagagcgatgcccttggttggcaatatattactgga
acacttccagatggtcgagcgtttgaccgccttgataacctacagattgagggttacaag
ttcgatccaaatggagaatatgttcgaagatggctccctgaacttgctagattgccgaca
gagtggatacatcatccatggaatgcgccagaaagtgtgctacaagctgctggaatcgaa
cttggttcgaattaccctcttcctatagtcgaaatagatgctgcagaagctaggttggaa
gaagcacttgcacacatgtggcagcaggaaggggcttcacaaactgcaatcgagaatgga
atggaagagggccttggagactcgtccgaatccattcctattgcattccctccggacaca
gacatggagatggacaatgaacctatcagaaacaatcctccaaatgcagtcattcgccgc
tatgaggatcaaatggtaccaagcatgacttcttctttcatccgcgttgcagatgaagag
acgtcagttgatctcagaagcacaggcgatgataacagagctgaggtcccttcaaatgta
aaccctgtagaggagctgagaagagaacgactcgcccaagctattatccagacaggtaga
acgaatgatggtttcctacaatccaatttcgcaagaggtcgtagaaattctgaagactca
acagcagagtcatccagtagcactagaagagagagagacggcgggattgtcccagtttgg
tccccctcgaattccacgtactctgatccattccgaggtgaggacaacagcattagcacc
agttcgtcttacttggctaggcatccacaggctcaccagctattctga
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