Salvia splendens (scarlet sage): 121808412
Help
Entry
121808412 CDS
T07627
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121808412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121808412
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121808412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
RMC1_N
EIF3I
Beta-prop_TEP1_2nd
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
121808412
NCBI-ProteinID:
XP_042064826
LinkDB
All DBs
Position
6:6537053..6539403
Genome browser
AA seq
568 aa
AA seq
DB search
MSLISQNALPKEVGKKKKREMVKDKIELVEEEVGDGDKTVVDPTRNKKRKKGRKEEDDEQ
LEIDEGKERKKLESFLFSNLYSPVGFGKDDEEEEAREEVDNNSVLFFTDRSADSTLSVYE
EDIESGDESTDELDINERKPVWVDDEEKKTSINIAKINKLRKLRKGEEESVISGEAYESR
LRAQHMKMNRGTDWARPNSQPVYSSEDDDSDKENGVVVASGYERPEYADDVLRSNEDLVL
NRSVKLLPGLLEYSRLSDANMKDPSQGPINSIQFHKNAQLLLVGGLDRALKFFQIDGKKN
EMIQSIFLEDCPIRKAAFLPDGSQAIISGRRKFAYSFDLIKAHVDKIGPLAGRDEKSLES
FEVSPDSKTIAFLGNEGCILLVSSKTKELIGTLKMNGSVRSVAFTNDGHQLLSSGGDGQI
YHWDLRTRLCFHKGVDEGCLTGTALSVPPVGNLFAAGSDSGIVNIYNRDEFIGGKRKPIK
VIENLTTKVDFMKFSPDAQILAISSRMKKNSMKLVHVPSLTVFSNWPPPNKAVHYPSCMD
FSPHGGFMAVGNAAGKVLLYKLHHYNRA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaatttctcaaaatgccttacctaaagaggtagggaagaagaaaaagagggag
atggtgaaagacaagattgaacttgtcgaagaagaggttggggatggagacaagactgtc
gtagatcctacgagaaataagaagagaaagaaagggcgaaaggaggaggatgacgagcaa
ttggaaattgacgaggggaaggagagaaagaagctagaaagctttttgtttagcaactta
tactcaccggttgggtttgggaaggacgatgaagaagaagaagctagagaggaggtggac
aacaactctgtattgttcttcactgataggtcagcagatagcacattgtctgtgtacgag
gaggacatagagtctggagatgaaagtactgatgaactggatatcaatgagagaaaacct
gtgtgggttgatgatgaagagaaaaagactagtataaacatagccaagattaacaaactg
cggaagctgaggaaaggagaggaagaaagtgtaatttctggtgaagcgtatgagtcaaga
ttgagagctcagcatatgaagatgaaccgaggtactgattgggcacgtcccaattctcag
ccagtgtatagttctgaagatgatgattctgacaaagaaaacggagtggtggtagccagt
ggttatgagcgacctgaatatgctgatgatgtcctcaggtcaaacgaagaccttgttctg
aacaggagtgtgaaattattaccggggcttcttgagtactcgagattgtctgacgccaat
atgaaggacccttcccaaggtcccattaattccattcagttccacaagaatgctcagcta
ctccttgttggtggtttggatagagcattgaagttttttcaaatagatgggaagaaaaat
gagatgatacagagcatttttctggaggactgtcctattcgaaaggctgctttcttgcct
gatggatcacaggccatcatatctggaaggaggaagtttgcttatagctttgacttaatc
aaagctcacgtggataagataggccctcttgcaggacgggatgagaagagcttggaatcg
tttgaggttagccctgattctaaaaccatcgcctttcttggaaacgaagggtgtattctg
ttagtgtcatcaaagacaaaagaactgattggtacgctgaagatgaatggaagtgttaga
tctgtagcattcactaatgatggacatcaattgttgagttctggtggagatgggcagatt
tatcactgggatctgaggacaaggttgtgcttccacaagggcgtcgatgaaggctgtctt
actggaacagctttgtctgttcccccagttggtaatttatttgcagcaggttcagacagt
gggattgtgaacatctacaacagagatgagttcataggtgggaagagaaaacctataaaa
gttatcgagaacttgactactaaggtggatttcatgaaattcagtccggacgctcaaatt
ctggccatcagttctcgcatgaagaagaatagcatgaagctggttcatgtcccatcttta
actgttttctcgaactggcctcctcctaataaggcggtgcactatccaagctgcatggat
tttagccctcacggaggtttcatggctgtgggaaatgctgcgggaaaagtcttgctgtac
aagttgcatcactataatcgggcttag
DBGET
integrated database retrieval system
