Salvia splendens (scarlet sage): 121808418
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Entry
121808418 CDS
T07627
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspl01002
]
121808418
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121808418
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121808418
Peptidases and inhibitors [BR:
sspl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121808418
Ubiquitin system [BR:
sspl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121808418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Viral_Hsp90
CpXC
Motif
Other DBs
NCBI-GeneID:
121808418
NCBI-ProteinID:
XP_042064831
LinkDB
All DBs
Position
6:complement(14942727..14949125)
Genome browser
AA seq
1003 aa
AA seq
DB search
MIRSNGAAAPHEPESDSALFHRSIDFHQARKHYNGFGNESSSDFKLVTLNPTSGPLKPSG
LEKITEKSSEFSEAALDPELSFEITFRRIGAGLRNLGNTCFLNSVLQCLTYTAPLAAYLQ
SGKHQNSCRTVGFCALCAIQKHVSRALQSSGRILEPKDLVSNLRCISRSFRNARQEDAHE
YMVNLLESMHRCCLPSGVPSESPSAYEKSLVHKIFGGRLCSQVKCMQCSHCSNKFDPFLD
LSLEIHKSDSLYKALAHFTSKELLDGGAREYQCDQCEEKVKASKQLTVHKAPQVLAVHLK
RFSSYAPGQKVDKRVAFEPTLDLKPFVSDPYDGDLKYTLYGVLVHYGWSTHSGHYYCFVR
TSSGMWYSLDDNQVFQVNERKVLEQKAYMLFYVRDRKDVGTKNHVNTLQKDKDNMVMNAI
GNVAYSKLNMELKEKIQIGSNERELNGSSALSGRIAPATALPNGKLTVEPLDLAINDKCA
SMKPPTKSPLKEDSPMELNSSVNGSDGASSGGYVATCHSILSIVEEHSTSSIVLSVEMPS
GCMDNDKVKPSESTQQAPDSAVLNRLSGDQCKMDPPISETNASTRSLPMGAIEEPEKNIC
DGRAPVSSCIEASSMKAVGPNTDVTVENGQRLDVESKLSNLPAATTDPISYCIEASTMKA
VGPNTDVTFENGQRLDVQSNLSNLPSATTEPVSYCIEASTMKAVGPNTDVTVANGQRIDV
QSKLSNLPSATTEPVRLRITKKKSQNLKVKWKLMKYQAVATSLSSNIVLGVGLCLKIKKH
KKLKKTHSSMLKKSSGLKVILIENALPPKVGQPASVEAIPSAVDQSTCSRKKEGKRVSDE
QNHNPSIQNTIGDNSILGAAIDKDFRERILLDGSTVSAAKQLDTRLSTAQGTGISEEHQR
ELRQNDIMNMLTRGLDETTVGRWNNNGAALSTKSKTRAPGTVQIGYIGGEWDEEYDRGKR
KKIRAPVVSFDGPNLFQEIAEKRSKTKRSKLERSRDGNQPFRI
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtccaacggggcggccgccccccatgaaccggaatccgattcagcgctgttc
cataggagtattgatttccaccaggcgaggaagcattacaatgggtttggaaacgaaagt
agcagtgattttaagctggtgacgctgaaccctacatctggaccgctcaagccttccggt
ttggaaaagataacggaaaaatcatcggagttttctgaggctgcgttggatcctgagctc
agcttcgagattacgttccgccgaattggtgcaggtttgcgtaacctcggaaacacttgt
ttccttaattcagtactgcaatgtctgacctatactgcaccattagccgcctatcttcaa
agtgggaagcatcagaattcttgtcgtactgtggggttctgtgctttatgtgctatccag
aaacatgttagtcgagcactgcagtcaagtgggagaattctagagcccaaggatcttgtt
tcgaacttaagatgcatatctcggagttttcgaaatgccaggcaagaagatgcccatgag
tacatggtgaatttgcttgaatcaatgcacaggtgctgcttaccgtctggagtgccaagt
gaatctcctagtgcttatgagaaaagcttagtccacaagatatttggtggtcgattgtgt
agtcaggtgaaatgcatgcagtgctcccactgctcaaacaaatttgatccattcttggat
ctaagtctagaaatacataaatcagactcattgtataaagcacttgctcatttcaccagc
aaagaactgttagatggaggtgctagggaatatcagtgtgatcaatgtgaggagaaagta
aaggcttccaagcagctaacagttcacaaggcaccccaagttcttgctgttcacctgaag
cgttttagttcatatgctcctggccaaaaagttgataaaagagttgcctttgaacctacc
ttggacttaaaacctttcgtctctgatccctatgatggggatctaaaatacactctctat
ggagttcttgttcattatggttggagcactcattctggccattattactgcttcgttcgc
acatcaagtggcatgtggtattcccttgacgacaatcaggttttccaagttaatgagagg
aaagttctggaacagaaggcctatatgcttttctatgttcgtgataggaaagacgttggt
acaaagaatcatgttaatacccttcagaaagataaagataacatggtgatgaatgctatt
ggaaatgtagcatattcaaaattgaacatggaattgaaagagaaaatccaaattggctca
aatgagagagagttaaatggctcttcagctttatccgggaggatagcaccagcgacagct
ctacctaacggcaagttgacagtggagcctttggaccttgcgataaatgacaagtgtgca
tcaatgaagccaccaacaaagtctccgctgaaggaagattctccaatggaattaaattca
agtgttaatggttctgatggtgcttcaagtggaggttatgttgcaacctgccacagcatc
ttgagtattgtagaagagcatagtacaagttctattgtattgtctgttgaaatgccgtca
ggctgcatggataatgacaaggtaaaacctagcgaatcaactcagcaggcaccagacagt
gctgtactcaacagattatctggagatcaatgcaaaatggatccccctatttctgaaacg
aatgctagcaccaggagtttgcccatgggagctattgaagaaccagagaaaaacatttgc
gatgggcgggcacctgtctcctcttgcattgaagcttcctccatgaaggctgttggtcca
aatactgatgtaactgttgaaaatgggcaacgactggatgtggagtccaagttatcaaac
ttacctgcagccaccactgatcctatctcctattgcattgaagcttccaccatgaaggct
gttggtccgaatactgatgtaacttttgaaaatgggcaaagactggatgtgcagtccaat
ttatcaaacttaccctcagccaccacagagcctgtctcctattgcattgaagcttccacc
atgaaggctgttggtccaaatactgatgtaactgttgcaaatgggcaaagaatagatgtg
caatccaagttatcaaacttaccttcagccaccacggagcctgtcagactcaggataact
aagaagaaaagccagaatcttaaagtaaaatggaagctcatgaagtatcaggcagttgcc
acatcactcagctctaacattgtattaggtgtgggtctctgcttaaaaattaaaaagcac
aagaaactgaagaaaacgcatagttctatgctgaagaagtcttctggtctgaaggtcatc
ttgattgagaatgccttaccaccaaaggtggggcaacctgcatctgtagaagcaattcct
tctgctgttgaccaatctacctgctcccgtaaaaaggaaggcaaacgtgtttcagatgag
caaaaccacaacccaagcatacaaaacactattggtgataatagcatattaggtgctgct
attgataaggatttcagagagaggattcttctcgatggatccacagtttctgctgcaaag
cagcttgatacaaggctctctactgctcaaggaactgggatatctgaagagcaccaaaga
gaattgaggcaaaatgatatcatgaacatgcttaccaggggcttagatgagacaactgtt
ggtcgctggaataataatggtgctgcactatctactaaatctaaaacaagagcacctggg
actgtgcagatcggttatattggtggtgagtgggatgaggagtatgacagaggaaagaga
aagaagataagggctcctgttgttagctttgatggaccaaatttgttccaagaaattgca
gaaaaaagatcgaaaacaaagagatcgaagcttgagagatccagagatgggaaccagcca
tttaggatatga
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