Salvia splendens (scarlet sage): 121808512
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Entry
121808512 CDS
T07627
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121808512
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121808512
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
121808512
NCBI-ProteinID:
XP_042064981
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Position
6:complement(3147146..3151019)
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AA seq
450 aa
AA seq
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MASKKSLPLFSLLLFAFVAGALCRIQKVEESAILSAVEKEEFLLQRSRNSTASEKLGGIE
EEEYYNEHAVDDPEEVARMVVMATRNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNRKR
LADCGIGFGRNAIGGRDGRYYVVTDAGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIT
LKQELIMNSFKTIDGRGVNVHIANGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSH
YGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVILL
GHSDSYMRDKTMQATIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTI
NSQGNRYLAPVNPFAKEVTKRVDTAAGKWKSWNWRSEGDLMLNGAYFTPSGAGASASYAR
ASSLGAKSSSMVGSITSGAGALGCRRGRQC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaagaaatcgctacctctgttttcgctgctgctgttcgcctttgtcgccgga
gctctgtgtagaatccagaaagtcgaagaatcagctattttgagtgcggttgagaaagag
gagtttctgttgcagaggtctcgtaattcgacggcgtcggaaaagttgggaggaattgag
gaagaggagtattacaatgaacacgcagttgatgatccagaagaggtggcaagaatggta
gtaatggccacaagaaacagcacggagaggagaaaactcggtttcttctcatgcggaacc
ggcaaccccatcgacgactgctggcgctgcgaccctaactggcagaagaaccggaagcgc
ctcgcggactgcgggattggcttcggtcgcaacgccattggtggccgcgacggccgctac
tatgtggtcacagacgctggcgacgacgaccctgtcaacccgaggccgggcaccctgcgc
cacgctgtcatccaggacgagcctctgtggatcgtcttcaagcgcgacatggtcatcacg
ctgaagcaggagctgatcatgaacagcttcaagaccatagatggacgtggtgtcaacgtg
cacattgctaacggcgcatgcatcacgatccagttcgttacgaatgtcatcatccatggc
ttgcacatccatgactgcaagccgactggtaatgcgatggtgaggagctcgccctcgcat
tacggctggaggactatggcggatggtgacgcgatttccatctttgggtcgagccatatt
tgggtcgaccataactcgctgtctaactgcgcggacgggcttgtggacgctgtcatggga
tccactgccatcaccatttccaacaactacttcacacaccacaatgaggtgattctgtta
ggccacagtgattcttacatgagagacaagacgatgcaggcgactatcgcattcaaccat
tttggagagggactcatccagagaatgccaaggtgcagacatggctacttccacgtcgtg
aacaacgactacactcactgggagatgtacgctataggtggaagtgcagagcccaccatc
aacagccaaggcaacagataccttgcaccagtcaatccttttgcaaaggaggtgacaaag
agagtcgacacagctgcaggcaaatggaagagctggaactggagatcagaaggagacctg
atgctgaacggagcttacttcacaccatccggagctggagcttcagccagctacgctcgt
gcttcgagtttgggtgcaaagtcttcctccatggtcggatccattacttccggtgcaggg
gcccttggctgccgccgtgggcggcagtgctag
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