Salvia splendens (scarlet sage): 121808589
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Entry
121808589 CDS
T07627
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121808589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sspl04040
]
121808589
Ion channels [BR:
sspl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121808589
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_2
Babuvirus_MP
Motif
Other DBs
NCBI-GeneID:
121808589
NCBI-ProteinID:
XP_042065087
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Position
6:complement(11632489..11638277)
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AA seq
757 aa
AA seq
DB search
MSSYERDEIPMLPTAYLQSDAGDDSGSRGLSTRRSASMSVPSNSMDSSEYEPSLVGFTGP
LRNPRRAPNTQMSGPLYANRNQEFVFQPPKGTLRLKATEPKLDGAANNGWSAENYGGRNE
HLLKSGQLGMCNDPYCTTCPMYYNVKGRTKPSRKTEIFDAKFHNMIHGDGKGWAKRMWSF
LFPYIGTVMNPHNGHVQRWNQFFVLACSFAVFLDPLFFFLLFVQQDNKCIVLNWPMTTAM
IVLRSMTDFIYLLHILLQFRLAYVAPESRVAGSGDLVDDPKLIARNYFRGCFAVDFFIVL
PLPQIIILVVLPGSIGANYAKNLLRAAILIQYIPRLWRFLPLVTGLSPTGFIFESAWANF
VINLLTFVLASHVVGSCWYLFGLQRVNQCFRDACSNSNITDCTEFIDCGHGNANERFTDS
RGDWDMWKNNENASACFGKEGFDFGIYETAVNLTTHRSLVKRYVYSLFWGFQQISTLAGN
QVPSYFEWEVLFTMAIIGIGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWMSHRR
LPEDLRRLVRDSERYTWAATRGVNEDSLMENLPEDLQREIRCHLFKFVKKVRIFQILHEP
IIDAIREKLKTKTYIKGSNIMVRGALVDKMVFIIRGQMVNKGEDGIETVLTEGGVCGEEL
LTWCLEHSSVNKDVKRRIPGPRLLSNRKVTCLTNVEAFVLRCADLEEVTSLFARFLKSPR
VQGAIRYESLYWRARAARQIQVAWKYRMKRINRADSV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttatgaaagagatgagatacctatgctaccaactgcatacttacagtcagac
gctggggatgactctggtagtagaggattgtcaaccagaagaagtgcttcgatgtctgtg
ccttcaaactctatggattcctctgaatatgagccaagtcttgtgggtttcaccggtcct
ttgagaaatccaagacgggctcctaatacacagatgagcggtcctttatatgcgaaccgc
aaccaggagtttgtctttcaacctcccaaaggtacactacgcctaaaggcgactgagccc
aaactagatggggctgccaataatggttggtcagcggagaattatgggggtaggaatgag
catcttttgaagtcagggcaactggggatgtgcaatgatccatactgcacaacttgtcca
atgtattacaatgttaaggggcgcacaaagccttcaagaaaaacagagatatttgatgca
aagtttcacaatatgatacatggagatgggaaaggttgggctaagagaatgtggtccttt
ctgttcccttatattggaacagttatgaacccccacaatggacatgttcaacggtggaac
cagttctttgtccttgcttgctcgtttgcagtgtttttggacccattattctttttcctg
ttatttgtgcagcaggataataagtgcatagtactaaattggccgatgacaacagcaatg
atcgtcttgagaagcatgactgacttcatttacttgctccatatactccttcagttcagg
ctagcttatgttgctcctgagtccagagttgctggatctggagatttagtcgatgaccct
aaattgattgctcgaaattatttccgtggatgctttgctgttgatttcttcattgtactg
ccccttccacagataattatattagtggtcttacccggttcaattggagcaaattatgca
aaaaatcttcttcgagcagcaatactcatacagtatattccaaggctgtggagattctta
cctttagttactggtctatctccaactggcttcatctttgaatcggcatgggcaaatttt
gtcatcaatcttcttacctttgttttggcaagccatgtagtcggctcgtgttggtatctc
tttggcctgcagagggtcaatcaatgttttcgagacgcttgtagtaacagcaatattacg
gactgtacggaattcatcgactgcggacacggaaatgctaacgagagattcacggatagt
agaggagattgggatatgtggaagaacaatgagaatgcaagtgcttgtttcgggaaagaa
ggttttgacttcgggatttatgagactgctgtcaatctaaccactcatagaagtttagtt
aaaagatacgtgtactcgttgttttgggggtttcagcaaattagtacccttgcgggaaat
caagttccgagctacttcgagtgggaagttcttttcaccatggctatcatagggattggt
ctcctgctttttgctttgcttattgggaatatgcagaattttctccaggctcttgggcgc
aggagattagaaatgtctctcaggcgccgtgatgttgagcagtggatgagtcatcgtcgc
ttgcctgaagatctacgaaggctagttcgagattcagagcgttatacttgggctgcaacg
agaggtgtaaacgaagatagtctaatggaaaacttaccagaagatcttcaacgagaaata
aggtgccatctcttcaagtttgtgaagaaagtccggattttccaaatactgcatgaacca
atcatagacgccatacgtgagaagctgaagactaaaacatatatcaaaggcagtaacatc
atggttcgtggtgccctcgtggacaaaatggttttcataatccggggacagatggttaac
aagggagaagacgggattgagactgttttaacagaggggggtgtctgtggggaagaactt
cttacctggtgcctcgagcattcttccgtaaataaagatgtgaagcgtaggatcccggga
cctaggttgttgagcaacaggaaggtaacctgcctgacaaatgtcgaagccttcgtcctg
cgctgtgctgatcttgaagaagtgacgagtttgtttgcaagattcttgaaaagtccacgc
gttcagggtgccatcaggtacgagtccctctactggcgcgcgcgtgcagccagacaaatc
caggtggcgtggaagtacagaatgaagcggataaaccgcgcagactccgtgtaa
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