Salvia splendens (scarlet sage): 121808599
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Entry
121808599 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121808599
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121808599
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Endotoxin_C
CarboxypepD_reg
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
121808599
NCBI-ProteinID:
XP_042065101
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Position
6:complement(7377465..7380873)
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AA seq
635 aa
AA seq
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MSKSNVTLSVSGSNIIIDNVLVRLTIMKPQGLLTAIKYAGIDNLLDTKSNQLNRGYWDIN
WNLPGGQDRYQLYILLRGSEYSVISLSNDNLEVSFKSSYDPSISGTRLPLTIDQRYIVRS
GISGFYCYAIYERPQGCPAFDLVQTRMVFKLQRDRFHYMAITDEKQRVMPMPEDLLPGRG
KTLIVPESVLLVNPINPDLKGEVDDKYQYSMENKDGGVHGWISSNPSVGFWIIFPSHEFR
NGGPTKQNLTCHTGPTCLAMLHGSHYIGNDMVAHFEQGEVWRKVFGPFFVYLNATKDVSQ
SYNLWTDAKKQTVMEESLWPYDFISSPYYLTSKERGSATGRLFVQDRYISDSLIPAKSAF
VGLSVATTPGSWQTESKDYQFWVQTDLDGNFSIKNVVPGVYGVHGWVPGVIGDYLYHQLV
TISQGLETEVGDVIYVPIRDGPTVWEIGYPDRTAATYYVPDVNPIYVNKLFVNTPEKYRQ
YGLWDRYTDLNPKNDQIFTIGVSDARKDWFFAHVDRRNGNNKYVPTTWEIRFYLQSVAAG
IYKLRLAIASATRSDLEIHVNQMNGEQLVFQVTNLGGDNAVCRHGIHGLYQLFSVDISSA
LLIHGDNSMFLTQARAGDALCGILYDYLRLEAPPT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagcaatgtaactctatctgtcagtggctccaatattataattgacaatgta
ttggtacggcttacaataatgaaaccacaaggactgctcacagccataaagtatgctgga
atagacaacttattagacaccaaatctaaccaacttaacagaggttactgggacatcaac
tggaacttgccaggaggccaagacagataccaattgtacatattgctaaggggatccgaa
tatagcgtgatcagtttgagcaacgataatctggaggtctcgtttaagtctagctatgac
ccttcaattagtgggacaaggcttcccctaactatagatcaaaggtacattgtaaggagt
ggaatttcgggtttctactgctatgccatctacgagcgccctcagggatgccctgccttt
gaccttgttcaaacacgcatggtgtttaagctgcaacgtgacaggtttcattacatggcg
atcacggatgagaaacaacgcgtaatgccaatgccagaggatctactgccaggcagaggc
aaaacgctgatcgtgcccgagtctgttttgctcgttaatcctatcaatccggaccttaaa
ggagaggttgacgacaaataccaatattcgatggaaaacaaggatggtggagtccatgga
tggataagctccaaccctagtgtgggattctggatcatcttccccagccatgagttccgc
aatggtggacccacaaagcaaaatctcacgtgccacaccggtcctacctgccttgctatg
ttacatggaagtcactacatagggaacgacatggttgctcactttgaacaaggtgaagta
tggagaaaggtgttcggacccttcttcgtctacctcaacgccactaaagatgtctcccaa
tcttacaatctatggacagatgcaaagaaacagacggtaatggaggagtcgttatggccg
tatgatttcatctcatcgccatactatctgacatccaaggagcgcggctctgctacagga
agactctttgtccaagatagatatatttctgattcgcttattcctgcaaagtctgccttt
gttgggctatcagttgcaacaacgcccggttcttggcaaactgaaagcaaggattaccaa
ttctgggtgcaaacagatttagatggaaactttagcataaaaaatgttgtgccaggagtt
tatggggttcatggttgggttccaggtgtgattggtgattacctctaccatcaacttgtt
actatctctcaaggattagaaacagaggtaggtgatgtaatctatgtgcccataagagat
gggccaactgtatgggagattggttacccagatcgaactgcagctacatattatgtgcct
gatgtcaatcccatctatgttaacaaattgttcgtcaacacccctgaaaaatacagacaa
tatggactatgggatagatacacagacctaaatcccaagaatgatcaaatcttcactata
ggggtgagtgatgcaaggaaagactggttctttgctcatgtcgataggaggaatggaaac
aataagtatgttccgacgacttgggagatcagattctacctacaatcggttgctgccgga
atttacaagttgagattggctattgcctcagccacccgctccgacttggagattcatgtt
aatcaaatgaatggtgagcagctagtgttccaagtgacaaatttgggtggcgataacgca
gtttgtcggcatggaatccatggactataccagcttttcagcgttgatatatcatcagca
ttgttgatccatggcgacaatagcatgtttctcacccaagcaagagctggtgatgcactt
tgtggaatactttacgattacctaaggcttgaagctccaccaacttga
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