Salvia splendens (scarlet sage): 121808603
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Entry
121808603 CDS
T07627
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121808603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121808603
03036 Chromosome and associated proteins [BR:
sspl03036
]
121808603
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121808603
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121808603
PBAF complex
121808603
GBAF(ncBAF) complex
121808603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
121808603
NCBI-ProteinID:
XP_042065106
LinkDB
All DBs
Position
6:complement(1102713..1108356)
Genome browser
AA seq
768 aa
AA seq
DB search
MPASSEARASWRKRKRDNSVASKSKLKEQDDDILDDNDEDDDPDLDPPQNNLESEDDPQI
PSSDRTAQIIGEKGDEKLVAGGLKLCEFPVAIKREIYRPHSSVFRILEYERAARFGDSRA
QGQSGVPVLENISYGQLQALSAVPRDNPSLLGVPSEETASGSGGGSYVITPPRIVAGSGV
TKRLGSAGRVHVVPVHSEWFSPSSVHRLERQVVPHFLSGKSTEHTPEKYMECRNFIVAKY
MENPEKHLAVANCQGLVAGIENEDLIRIVRFLDHWGIINYCATPPKHEAPKEGTYLSEDS
NNELRVPLAALKSIDSLIKFDKPKCRLKATDVYPELAHQQEEDSDFDSAIREQLSEHQCN
CCSRPISAVYYQSQKEVDVRLCLDCYQEGGFVAGHSSLDFVKENYMKDYGDLDGDSWSDQ
ETLLLLEGMQLYSENWNKIAEHIGSKSKAQCILHFVRLPLDGAPLDNIDVPSTSGSSSLS
NQDCHGRSEPNSNGTCLEAEDSENKFPFSSSGNPVMSLVAFIASALGPRVAAACAHASLG
SLSMESGKEGHAGAPLSQYDAEGATLSAEKVISAAEDGLDAAAMKSKLFADHEEREIQRL
SANIINHQLKRLELKLKQFAEIETLLMRECEQMERTRQRIAAERGLMMSGQFGSAGVQRP
MGLPGVSNAAMNNSAGNNRQQHIQGSHQPFVSGYGNTQPIHPHMSLMQQQQHQQQQQGMY
SLGPRLPLSAIHPSSSAPNAMFSPASNSQPSLGHPMLRPLSGTKSGLG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttcctcagaagcaagagcaagttggaggaagcggaagagggacaactcagtt
gcgagtaagtccaagctgaaagagcaggatgatgacatacttgacgataatgatgaagat
gatgacccagatctggatcccccacaaaacaatctggaaagtgaagatgatccgcaaatt
cctagttctgataggacagcccagataataggagagaaaggggatgaaaagttggttgct
ggtggactgaagttatgtgagtttccagttgcgatcaagagggagatatataggccccac
tcatctgtctttcgaattttggaatatgagagggctgcgagatttggggatagcagagcc
caagggcagagtggagtgccagtgttggagaatatttcttatgggcagctgcaggcactt
tctgcagtgcctcgagacaatccatctcttttaggggttccctcagaggagactgcaagt
ggtagtggaggtggttcatatgtgatcacaccacctaggatagttgctggatctggtgtt
actaaaaggctcgggagtgcaggtcgtgttcatgtggtgccagtacattcagaatggttt
tcaccaagttcagtgcatagattggagagacaagtggttccacatttcctttctgggaaa
tccacagaacatacacctgaaaagtacatggagtgtcggaatttcattgttgctaagtat
atggaaaaccctgaaaagcacctagcggtggctaactgccagggtctagtagctggtatt
gaaaatgaggacttaattcgaattgtgaggtttctggatcattgggggattatcaactat
tgtgcaactcctcctaagcatgaggccccaaaggagggaacttacttgtctgaggactca
aataatgaacttcgcgtgcctttggctgctttaaaatctattgacagcttaatcaagttt
gataagccaaaatgtaggctgaaggcaactgatgtttatccagaacttgcacatcagcag
gaagaggattctgattttgacagtgctataagagagcaattatccgagcaccaatgcaac
tgttgttcacgacctatatctgcagtgtactaccagtcacagaaggaggttgatgtgaga
ctctgtttggattgttatcaagaggggggattcgttgctggtcactctagccttgatttt
gtaaaagagaattacatgaaagattatggagacctggatggggatagttggtctgaccag
gaaacattgctgctgcttgagggaatgcagctttatagtgaaaactggaataaaattgcc
gagcatattggctccaaatcaaaagcgcagtgcattctccattttgtccgtcttcctctg
gatggtgctccactggacaatatcgatgttccaagtacatctggttcatcaagtttgagc
aatcaagactgtcatggaagatcagagccaaattcaaatggtacctgcttggaagcagag
gacagtgaaaataaatttcctttctcaagctctggaaacccggtgatgtctctggtggcg
tttattgcttctgcattgggaccaagagtggctgcagcctgtgcccatgcatctttgggt
tcattgtctatggagagtggcaaggaagggcatgctggagctcctttgagccagtatgat
gctgaaggtgctacactatctgctgaaaaagtgatctctgcggctgaagatggtcttgat
gcagcagccatgaaatcaaaactttttgctgatcatgaagagcgtgaaatccagcgatta
tctgctaatatcataaaccatcagttgaagagattggagctgaagttgaagcagtttgca
gaaattgagaccttgctaatgagagaatgtgagcagatggaaaggacaaggcagaggatt
gctgctgaacgcggcctcatgatgtcgggacagtttggttctgctggggtgcaacggcca
atgggactaccgggtgtcagtaacgctgctatgaataattctgcaggaaataataggcag
cagcacattcaaggctcccatcaacctttcgtttctggatacggaaatacccaacccatc
cacccccacatgtccctgatgcagcagcagcaacatcagcaacaacaacagggaatgtat
agccttggtcccaggctgcccctttcagctatacatccatcttcttcagcccctaatgcc
atgttcagcccggcatccaattctcagccttctctcggccatccaatgctcagaccacta
tccgggactaaatctggtttaggttag
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