Salvia splendens (scarlet sage): 121808645
Help
Entry
121808645 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121808645
09124 Replication and repair
03420 Nucleotide excision repair
121808645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121808645
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121808645
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121808645
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121808645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
Dsc3_N
MmeI_C
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
121808645
NCBI-ProteinID:
XP_042065165
LinkDB
All DBs
Position
6:complement(19128278..19131997)
Genome browser
AA seq
373 aa
AA seq
DB search
MKLTVKTLKGSHFQISVPATDTIMAVKKSIEDVQGKDNYPCGQQLLIYNGKVLKDESTLA
DNNVSEDGFLVVMLSKSKSLSSSASTSSQPASTAAPASKIAVASNPAPPASIPAPVAEAQ
ASVPAPKSTGPASVAPLANDQSGSYDEAASSLVAPDNLDQTIQQLIDMGGGNWDKETVRR
ALRAAYNNAERAVDYLYSGIPETAEVDVPLAQPLVDSMIGTGSPALGGPNSSPLNLFPQE
TISGAGSLGFLRNNQQFQALRSLVQANPQILQPMLQELGKQNPSLLRLIQENHQEFLQLI
NEPVDGSEGDIFDQAEQDMPHAVSVTPAEQEAIERMEAMGFDRALVIEAFLACDRNEELA
LNYLLENAGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaaaactctcaaaggcagccacttccaaattagcgtccctgccacc
gataccataatggctgttaagaaaagcattgaagatgtgcaaggcaaagataattatcca
tgtggtcagcagttgttgatttataatgggaaagtgttgaaagatgaaagtaccttagct
gataacaatgtctccgaagatggctttcttgttgtcatgctaagcaagagcaaaagtttg
agctcaagcgcgtcaacatcttctcagcctgcttctactgctgcaccagctagtaaaata
gctgtagcgagtaatccagctccaccggctagtattcctgctcctgtggctgaagctcaa
gcatccgtaccggctcctaagagcaccggaccagcttctgttgctccattagcgaatgac
caatctggatcatatgacgaagctgcttccagtttagttgctcctgataatcttgaccag
actattcaacaactgattgatatgggtggtggtaattgggacaaagagacagtgagacgt
gctcttcgagctgcatacaataatgcagaacgagccgttgactacttgtattcaggaatc
cctgagaccgcagaagtggatgtaccattggcccaacctcttgtcgactccatgattgga
actggttcaccagctttaggaggaccgaactcatccccgttgaatttgtttcctcaggag
actatttctggtgctggatccctcggtttcctcaggaacaaccaacagtttcaagccctg
cgttcgctggttcaagctaatccacagattctgcagcccatgcttcaggagcttggaaag
caaaatccttcactcctgagactcatacaagaaaaccatcaggagttcctccaattaatt
aatgaacctgtcgatggttctgagggggatatatttgatcaggctgagcaggacatgccc
catgccgtgagtgttacacctgcagaacaggaggcaattgaaagaatggaagcaatggga
ttcgatagagctcttgtgatcgaggcatttttagcttgtgatcgcaatgaagagctagca
ctgaactacttgctggaaaacgccggagattttgaagattga
DBGET
integrated database retrieval system
