Salvia splendens (scarlet sage): 121808653
Help
Entry
121808653 CDS
T07627
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121808653
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121808653
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121808653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
121808653
NCBI-ProteinID:
XP_042065177
LinkDB
All DBs
Position
6:945142..950829
Genome browser
AA seq
851 aa
AA seq
DB search
MRAGGILAASKTELKKKQEQAKKSKSCGFESLGLSLNIYNGVKKKGYRVPTPIQRKTMPL
IITGYDVVAMARTGSGKTAAFLIPMLQKLQQHVPQAGVRALILSPTRDLALQTFKFAKEL
GRYTGLRASLLVGGDSMESQFEELAQRPDYIIATPGRLMHHLEEVEDMSLRTVEYVVFDE
ADCLFSMGFAEQLHKILAQLSENRQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETKIS
PDLKLCFFTLREEEKHAAVLYLVRDHIRSDEQTLIFVATKYHVEFLYAMFKEDGIKASVC
YGDMDHDARKVHVSEFRARKTMLLIVTDVAARGIDIPLLDNVINFDFPPKPKLFVHRVGR
AARAGRTGAAYSFVTSEDIAYMLDLHLFLSKPIRPAPTEEELLKDMDDIMTRIDQAMANG
DTVYGRLPQRPIDLISDRVREILDSSAELSTLKGPLSKAFGLYSKTKAKPSKESIKRVKK
LPREGLHPMFRNVLGGDELTALAFSERLKAFRPKQTILEAEGDAAKSKNHQGSVSQWSDI
MKIKRAVHEEVINKVQQQRSRDDDAKKETEADDIPKTKRKQVSGMKRKAQSFKDDEYFIS
SVPVNQHFEAGLAVRGNQGFESNRLDAAVLDINADDGSGMQKQKSTYHWDKRSKKYIKLN
NGDRVTASGKIKTESGAKVKAKSTGIYKRWKEKSHSKVSLRGTNDIAADGSASSSGASGF
RGDHRGFKGGRNLKRPVHNAHVRSEIKDLNQVSKDRQKKADRVSYLKSQQNKKGKKFGKN
SKRGMSSNRGKGGYRGKGGDDRGKSGYRGKGGDDRGKSGNRGKSGGGKFGSKGKFDNKGK
SGGGNRGKGKY
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggaggcattctggctgcttcgaaaacggagctcaagaagaaacaggagcaa
gcaaagaaatcgaaatcatgtggattcgagtctcttggactgagtctcaacatctacaat
ggggtgaagaagaagggttatagagttccgacgcccattcagaggaaaaccatgccattg
attataacaggatacgacgtcgtcgccatggcacgcactggctccggcaagacggcggcg
tttctgattcccatgctccagaaactccagcagcacgtgccgcaggctggagttagggct
cttattctgtcgcccacgcgtgacttagctcttcagactttcaaattcgccaaagaactt
ggccgatatacaggcctacgtgctagcttactagttggtggtgatagtatggaaagccaa
tttgaggaattggcacagcgtcctgattacataattgctactcctggtaggcttatgcat
catttggaagaggttgaggacatgtctttacgcactgtggaatatgttgtttttgatgaa
gccgactgcctctttagcatgggatttgcagaacagttgcacaagatccttgcacagctg
agcgagaatcgtcagactttgcttttcagtgcaactttaccgagtgcccttgcagagttt
gcaaaggctggtcttagggatcctcaactagtcaggctcgatttggagacgaagataagt
ccggacttgaaactttgctttttcactttaagagaggaagaaaaacatgctgcagtgctt
tatttggtaagggatcatatacgttctgatgaacagactctaatttttgttgcaaccaaa
tatcatgtcgagtttctctatgccatgttcaaagaagatggtatcaaggcatctgtttgt
tatggagatatggatcatgatgcccgcaaggttcatgtatcagaatttagggctagaaag
acaatgttgctgattgtgacagatgtggctgcaaggggaattgacatccctttacttgat
aatgtgatcaattttgactttcctccgaaacccaagctctttgtacatcgcgtggggaga
gctgcaagagctggccgaaccggtgctgcatattcttttgttacatcagaggacattgct
tacatgttagaccttcatctctttctctcgaaaccgatcaggcctgctccaacagaggaa
gagctgctgaaagatatggatgatattatgactagaatagatcaagccatggcaaatgga
gacactgtttatgggcgtttgccccagagacctatagatctgatttcagacagagtccga
gaaatacttgattcatctgcagaattgagtactttgaagggacctttatcgaaagcattt
ggattgtactcaaagacgaaagcgaaaccatccaaggagtccatcaaaagagtgaaaaaa
ttgccccgtgaaggtttacatccaatgtttaggaatgtcttgggtggcgacgaactaaca
gctttggccttttctgagcgtctaaaagcatttagacccaagcaaaccatcctggaagct
gaaggggatgctgcaaaatcaaaaaatcatcagggatctgttagtcaatggtccgatata
atgaagattaaaagagctgttcatgaggaggtgattaataaagttcagcaacagcgttcc
agagatgatgatgctaagaaggaaactgaagctgatgacattccaaaaaccaagcggaaa
caagtatctggcatgaaaaggaaagctcagagtttcaaagatgatgagtatttcataagt
tctgtacctgtaaaccagcattttgaagcaggacttgcagtgagaggtaaccaaggcttt
gaatcaaataggttggatgctgcagttctagacatcaatgccgatgacggttctggaatg
cagaagcagaaatctacatatcattgggacaagagaagcaaaaagtatatcaagctgaat
aatggagatcgtgtgacggccagtgggaagattaaaacagaaagtggcgcgaaagtgaaa
gccaagagcactgggatatacaagagatggaaagaaaaatcacacagcaaggtatctctt
agaggaacaaacgacattgctgcagatggaagtgctagttcatcaggtgcttctggtttc
cgaggggaccaccggggattcaagggcggaagaaaccttaaaagacctgtacacaatgcc
catgtccgatctgagatcaaggatctcaaccaggttagcaaggaccggcaaaagaaggcg
gaccgtgtgtcttatcttaagagccaacagaacaagaaaggaaagaagtttggaaagaat
agcaagagaggaatgagtagcaatagaggaaagggtggctatagaggaaagggtggtgat
gatagaggaaagagtggctatagaggaaagggtggtgatgatagaggaaagagtggaaat
agaggaaagagtggtggtgggaagtttggaagtaaggggaagtttgataacaaaggaaag
agtggtggtggaaatagaggaaagggcaagtactag
DBGET
integrated database retrieval system
