Salvia splendens (scarlet sage): 121808896
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Entry
121808896 CDS
T07627
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like isoform X1
KO
K03253
translation initiation factor 3 subunit B
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121808896
03012 Translation factors [BR:
sspl03012
]
121808896
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121808896
Translation factors [BR:
sspl03012
]
Eukaryotic type
Initiation factors
eIF-3
121808896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
RRM_1
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Tricorn_2nd
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
121808896
NCBI-ProteinID:
XP_042065391
LinkDB
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Position
6:complement(5532812..5537635)
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AA seq
715 aa
AA seq
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MADVMSMEDIQATAARLNVDLDSLDLDSVRLPAGETFGVISDDDDLKKEEDFEFEEGFGN
IIVVDNLPVVPKEKFEKLEGVVRKIYSQIGVIKEGGLWMPTDPDTGKTQGYCFIEYNTPQ
EAELAKEKTHGYKLDRSHIFSVNMFDEIEKFLKVPEEWAPPESKPYTPGENLQKWLMDEK
ARDQFVIRAGSDTEVLWNDARQSKPELVYKRSYWTESFVQWSPLGTYLATVHRQGAAVWG
GATTFNRLMRYQHSQVKLIDFSPGERFLVTYSSQEPSNPRDTHRVVINIFDVRSGKVMRD
FKGSADEFAIGGTGGVSGVSWPVFRWGGGREDKYFARIGKNAVSVYETETFGLIDKKSIK
VENVIDFSWSPTDSILALFVPELGGGNQPARVSLVQIPSKQELRQKNLFSVSDCKLYWQS
NGEYLAVKVERYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFA
VIHGDNPRPDVSFYSMRSGTNTGRVSKLTTLKGKQANALFWSPGGRFIILAGLKGFNGQL
EFYNVDELETMAQAEHFMATDVEWDPTGRYCVTAVTSVHEMENGFNVWSFNGKLLYRILK
DHFFQFLWRPRPPSFLTAEKEEEIAKNLKKYSKKYEAEDQDVSMLLSEQDREKRKALKEE
WARWISEWKRLHEEEKLERQKLRDGEASDEEEEYEAKEVEVEELLDVSEEVISFD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgatgtcgatggaagatatacaggccacagccgcccgcctcaatgtcgac
ctcgactctctcgatctcgattcggtccgcctccccgccggagaaaccttcggcgttatc
agtgatgatgatgatttgaaaaaggaggaagattttgaattcgaagagggtttcggtaac
ataatagtggtggacaatttgccggtggtgcccaaagagaagtttgagaagctagaagga
gttgtgcggaagatatacagtcagattggtgttatcaaagagggtggtctctggatgcca
actgatcccgacactggtaaaacccagggatactgcttcattgagtataacactcctcag
gaagctgaacttgcaaaggaaaaaacccacgggtacaagctggatcgatctcacatattt
tctgttaatatgtttgatgaaattgagaagtttttaaaggtcccagaggagtgggctcct
ccagaaagcaagccatatactccaggggagaatcttcaaaaatggcttatggatgaaaaa
gcccgggatcagtttgtgatccgcgctggctctgataccgaggttttatggaatgatgca
aggcaatctaaacctgaacttgtttacaaaagatcttactggacagaaagttttgttcag
tggtcgccacttggtacttacttagccacagtacacaggcagggcgctgcagtttggggt
ggtgctactactttcaacaggttgatgcgttatcaacattcccaggtaaaactgatcgac
ttttcccctggtgagagatttttggtgacttacagcagccaggagcctagcaatccccgt
gacacacatagggtcgtgattaacatttttgatgtgagaagtggaaaagtgatgagagat
ttcaaaggtagtgcagatgaatttgctattggtggaactggaggtgtcagtggtgtgtct
tggcctgttttcagatggggtggcggacgagaagataagtactttgccagaataggaaag
aatgctgtgtctgtttatgaaactgaaacctttggtctaattgacaagaaatctataaag
gtagaaaatgttattgacttcagctggtctcctacggattccattcttgccctttttgtg
ccagagctaggcggaggaaatcaacctgcgagggtgagtcttgtgcaaatcccaagcaaa
caagagttgaggcaaaagaatctcttcagtgtcagtgattgcaaattatactggcaaagt
aatggggaatatcttgctgtcaaagttgaaaggtatacaaaaacaaagaaaagcacatat
actggctttgagcttttcaggatcaaggaaagggacatacctattgaggttctagagctt
gagaataagaatgataagattattgcctttgcatgggagccaaaaggccacaggtttgca
gtcattcatggtgataatccaaggcctgatgtgagtttctactcgatgcgtagtgggact
aacactggccgggtttcgaagctcacaaccctcaagggcaagcaggccaatgctcttttc
tggtctccaggtggccgttttattattcttgctggattgaaaggttttaatggacagttg
gagttttataatgtcgatgagcttgagaccatggctcaagctgagcattttatggcaaca
gatgtcgagtgggatcctactggaaggtattgcgtgactgcagtcacatccgtccatgag
atggaaaatggttttaacgtgtggtccttcaatggaaaactgctataccgaatccttaag
gatcatttctttcaatttctgtggcgcccaaggcctccatctttcttgacagctgaaaag
gaagaagagattgccaagaatttgaagaagtacagcaagaaatacgaggctgaggatcaa
gatgtatctatgttgctgagtgagcaggaccgtgagaagagaaaggcgctgaaggaagag
tgggctagatggattagtgaatggaagcgattgcacgaggaagaaaaattggagagacag
aagctgcgtgatggagaagcgagtgatgaggaagaagagtacgaagcgaaagaggtggaa
gtagaggaattattggatgtctcggaagaagttatctcttttgactga
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