Salvia splendens (scarlet sage): 121809191
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Entry
121809191 CDS
T07627
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121809191
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121809191
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121809191
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121809191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_LRRK2
WDR54
Beta-prop_NUP159_NUP214
TPR_GEMI5
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
121809191
NCBI-ProteinID:
XP_042065665
LinkDB
All DBs
Position
6:35397205..35405630
Genome browser
AA seq
727 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWDYQTQTMVKSFEVTEQPV
RSAKFIARKQWVVAGSDDMHIHVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWERGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGAVRIWHSTTYRLENTLNYGFERVWAVSYMRGSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWSKHNEIQTVNIKSIGADYDVADGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIMTSSILWVSSVGQECCTTIPYSMDRTSENLNIFPRTMNHLLHV
LILFNFVNSVAHFLESRGMIEDALEVATDADYRFELAIQLGKLEIAKEIATEAQSESKWK
QLGELAMSTGKLGMAEECLKQANDLSGLLLLYSSLGNAEGICELVSLAKENGKNNVAFLC
LFMLGKLEDCLQLLIESNRIPEAALMARSYLPSKVSEIVALWRKDLNKINQKAAESFADP
EEYPNMFEDWQVALAVEAKAAETRGKFPPAAEYMQHADRSIASLVEIFRNMQIEDEHLEN
GGLDYEDGEPNGDSLQEPDDTQLEGHDGSQEEAGVVDADSTDSAVLVNGNEVEEDGGSSN
EENPLPN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactagaaatcaagaggaaacttgcacaaagatcagaaagagtaaagtct
gtggatctacatccaacagagccatggatattggcgagcctgtattctgggactctttgc
atctgggattatcagacccagacaatggttaaatcttttgaggttactgaacaaccagtt
agatctgctaagtttatagcacgaaaacagtgggtggttgctggctctgatgacatgcac
atacatgtctacaattacaatacgatggataaggttaaagtatttgaggcccacacagac
tatatcaggtgtgtggcagttcatcccactctcccttatgtgttgtcatcctcagatgat
atgctcataaaactctgggactgggaaagggggtggttatgcactcaaatatttgagggt
cactcccactacgtgatgcaagtgacttttaatcctaaagataccaatacttttgccagt
gcatctcttgatcgcaccattaagatttggaaccttggctcccctgatccaaattttact
cttgatgctcacctgaaaggagtcaactgtgttgattattttacgggtggtgataaacct
tatttaatcactggctctgatgatcacactgctaaggtttgggattatcagacaaagagc
tgtgtccagacactagaaggacacacacataatgtttctgcagtttgtttccaccctgaa
ctccccattataataacaggttctgaggatggtgcagttcgcatatggcattccaccaca
tatagacttgaaaacacattgaattacggttttgaaagagtttgggcagttagttacatg
agaggatcaagacgggttgtaattggctatgatgaaggaaccataatggtaaagcttggt
cgagaagtacctgttgcaagcatggacaatagtgggaaaattatatggtctaagcataat
gagatccagacagtcaacattaagagcattggggccgattatgatgttgctgatggagag
agattgcctttagctgtgaaggaattgggaacctgtgacctttatccacagagtttgaaa
cacaaccctaatggtaggtttgttgttgtatgcggggatggtgagtacatcatgacttct
tcgatattatgggtttcatctgttggtcaagaatgctgtactactattccttattctatg
gatcggactagtgagaatctgaatatatttcctagaactatgaatcatctacttcatgtt
ttaatattatttaattttgtcaacagtgtggcccatttcttggaatcacgagggatgata
gaagatgcccttgaagttgctacggatgcggactacagatttgagttagccatacaactt
ggcaagctcgagattgcaaaggaaatagcaactgaagcacagagtgagtctaaatggaaa
caattgggtgaattggccatgtctactggaaagttggggatggcagaagagtgtttgaag
caagctaatgaccttagtggtttattgctactctattcatctttaggcaatgctgaggga
atttgtgaacttgtctctcttgcaaaagaaaatggtaaaaacaatgttgcatttctctgt
ctgtttatgttgggtaaattggaggattgcctacaactgttgatagagagcaatcggata
cctgaagctgcattgatggctcggtcttaccttccaagtaaggtgtcagaaattgttgct
ctttggagaaaggacctcaacaagattaaccagaaagctgcagaatcatttgctgatcct
gaagaatacccaaatatgtttgaggattggcaagtcgcacttgctgttgaagctaaagct
gccgagacaaggggcaagtttcctccagcagcagaatacatgcaacatgccgatagatct
atagcaagtcttgtagaaattttcagaaacatgcaaatagaagatgagcacctagaaaat
ggaggtttggattatgaggatggagaaccaaatggtgattcgttacaagagccggatgac
acccaactagagggacatgatgggagtcaagaagaggctggtgtggttgatgctgacagt
acagacagtgcggtacttgtgaacggaaatgaggtggaggaagatgggggttcgagtaat
gaagaaaaccctctgcctaactaa
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