Salvia splendens (scarlet sage): 121809467
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Entry
121809467 CDS
T07627
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121809467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121809467
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121809467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
HALZ
Motif
Other DBs
NCBI-GeneID:
121809467
NCBI-ProteinID:
XP_042066039
LinkDB
All DBs
Position
6:11338460..11356665
Genome browser
AA seq
2073 aa
AA seq
DB search
MPLFVSDEEYRRCSHDAALLTEKADDFIRGLYNQIETVKAEADAASITLEQTCALNEQKY
VSLSAEYSSLQLQNSETSALLEQRDAEIARLKDEKQQFLLQSIEKDGEVERLMREASELH
RSKRQLMELVEQRDLEINEKNATIKSYLDKIVNLTENLASKDARIRDIESELGRLHATSD
RLLQEKELLERHNSWLNEELTIKVNDLIQVRKEYGVYEADMSSKLADVEHKLNESANSLK
FHKDKARELEEKLASMEIELLSTRDAAAAAEQRSSAEISTITKLADLYKESSEEWSKKAG
ELEGVIKALETHLNQVETEYKDTLDKEVSARKEVEKEYADLKDMLQSCQTELEKLKRGNE
LQHLPLSSFTTGSLINSVDAGEMVLDDRAIIPIVPAGVSGTALAASLLRDGWSLGKIYAK
YQEAVDALRHEQLGRKQSQAILERVLYEIEEKAGVIIDEREEHERLVEAYSALDQKLQQT
LSGHSALQITVQELKATLKRQERDYAVAQKEIVELQQQVAVLLKECRDVQLRCGSVSPYQ
DDQLISGISVPVGTESRAEKVILDHLLTFKDINGLVEQNVQLRSIVHNLSDQIEDSGAEL
KEKYEKELQMHKEETVSKVKAVLQRAEEQERMIESLHTSVAMYKKLYEEEQKLRAYPTHV
HEAVPERGGREIIPIQENSHEASRKHEHTLERLRSLEEDLAKSKNDLISLRSDRDRLETV
AMFAEEKLGRFMKEFEQQREEHNGIRARNVEFSQIIVDYQRKLRESAESLDAANELSRKL
TMEVSILKQEKEMLQNSEKRASDEVCSLSQRVHRLQATLDTMQSAEEVREEARGVERRKQ
EDYANKIEREWAEAKRELQEQRDLVRSLSLDHGSSLKDAHKQIDELNKELANSLRSVANA
ESRAAIAEARYSDLEKIMESTRTKGSDGVDSGPSSSSEKMLAKFRDEIEKLREEAEASKN
HMLQYKSIAQVNEEALTQLELAHENFKKEADEVKKSLENEIHLLREHVNELESECKLKTE
EANSATSGKEEALAGALSEIASVKDAFSVKISQIVVMESQISTLKEDLESEHKKWRIAQD
NYERQVILQSETIQELTKTSQALDSAQKEASELRKVVDVLKTENVELKSKWETEKLAIEV
YRNEADKKYTEINELNKILHSQLEALHIKLAEKEKGIASGSSSKNLGGDDGLQSVVNYLR
RSKEIAETEISLLKQEKHRLQSQLESALKSAESAQTLLQAERGKSRASLLTDEEFESLQL
QVREITLLRESNVQLREENRHNFEECLKLREAFQNAKIEIENLEKLLRERDRELEACRKE
IEILKEEKMDLEKRIAELVQKCKDVDVNDYNQLKESSKQMQMSLAEKDSQLEEVKKLLLE
KQETVSILERDLARSKTEVSERENKIDEVSQTEASQKSEIDRLKRNYMQARRKFENLVKE
KDEMSKEVQSLSKQLEEARQALSKQLEEAKLVKRNTVDSGEQQKEKDTRIQILERTVERQ
RDDLRKEKEDHHKEKQKFLKIRKTIIESHENVTQEKRRITDDLTKHKQALKALQDEVEKI
KNPGSSQSESASSNILDDFASAYFLAVDNFEQLAQPAFSVPDSTTTDAPPLDNATSVAVP
TGQAVPSFQTPEPPAASVPAARAEEKEKRPALTKANLKMGRKLVRPNITKPREPQGDVEM
TEGDESNTGLPSHSTETQGTVSAPATASARKRMQDEMLNTEETTSDVPAPLHKKSKAPDS
LQVGGDELAAAPTKLPEAVITEESSDDMGNLQQIKEEVVEKDELDTVEDQTVEPLADEEF
SEPVDAADEKLEKPSDIMLSDDQLRDQTELDIQRIVAESGGEKEEGEVVGDFADNDGDSS
AINETGGPGNGELQGEQSTDPEKSPSIEPLGLEAGEIDTSDTLEDEKIGDLNETITDNSD
KLIHGADSGAEIDRAPGSSNPPSEEASISTTVAIVDVGPSDQPGSTPPQDSGAKPVSPLN
SGGSTPPQDSGAKPVSPLNSGGSTLPQDSGAKPASPLNSGATTINLQERARQRAHLRQAG
MGGVTSSPGRARGRTIRGRGVRGGRTGRGQSPG
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcgtatcggacgaagaataccggcggtgctcgcacgatgcggcgcttttg
acggagaaagcggacgacttcatccgtggactgtacaatcaaatagagacggtgaaggcg
gaggccgacgctgcctccatcactctcgagcagacgtgcgcactcaacgaacaaaaatac
gtttccctttccgcggagtactcttctctccagctacagaactccgagacaagtgctttg
ctcgaacagcgcgatgctgaaattgcgaggctgaaagatgagaaacaacaatttctgctt
cagtctattgaaaaggatggggaggtagagaggttgatgagggaagcatcagagcttcat
agatcgaagaggcagctgatggagttggtggaacaaagggacttggaaatcaacgagaaa
aatgctacaataaagagttatcttgataagattgttaatttgactgaaaaccttgcatca
aaagacgcacggataagggacatagaatctgaattggggcgattgcatgcaacatccgac
cgtttattgcaggagaaggagcttctcgagaggcataattcatggcttaatgaggagttg
acgattaaggttaatgatctgatccaggttcggaaggaatatggagtatatgaggctgat
atgtctagcaaacttgcagatgttgaacacaaattgaatgagagtgccaattctttgaaa
tttcacaaagacaaagcgagagagttggaggagaaactggcatcgatggaaatagagttg
ttgtcaactagagatgcagctgctgctgctgagcagcgttcctcagctgaaatttcaaca
ataaccaaacttgctgatttatataaagaaagctcggaggaatggtccaagaaggcagga
gaacttgagggagtcatcaaggctcttgaaactcacttaaatcaagttgaaactgaatac
aaagatacgcttgacaaagaagtgtctgcaaggaaggaagtggaaaaggaatatgctgat
ttaaaagatatgctacaaagctgccaaacagaattggagaagttaaaaagaggaaatgaa
cttcaacaccttcctctgagtagttttacaactggctcattgataaattcagttgatgct
ggtgaaatggttttggatgatcgagcaattattcctatagttcctgccggagtttctgga
acagcgttggcagcttcacttcttagggatggatggagtctggggaaaatatatgcaaaa
tatcaagaggctgttgatgctctacggcatgagcagttggggagaaagcaatcccaagct
atattggagcgtgtgctttatgaaattgaagaaaaagccggagtcatcattgatgaaaga
gaagaacatgaaagacttgtcgaggcctactctgctttagatcagaaactgcagcagaca
ctatcaggacattccgctctgcagattaccgttcaggaactcaaggctacgttaaagagg
caggagcgtgactatgcagttgctcagaaggagattgttgagctccagcaacaggtggct
gtactgttaaaggagtgtagagatgtccagttgcgttgtggatcagtttccccttatcaa
gatgatcagctcattagtgggatttctgtgccagtgggtactgaatctagagctgaaaaa
gtcatattggatcacctgttgaccttcaaagacataaatggattagtagaacagaatgtc
cagctgcgcagtattgttcacaatctatctgatcagattgaagatagcggagcagagtta
aaggaaaagtatgagaaggagcttcagatgcataaagaagagactgtgtctaaagttaaa
gcagtattgcagagggcagaggaacaggagcgcatgattgagtcgcttcatacctctgtg
gccatgtacaagaagctctatgaagaggagcaaaaacttcgtgcttatcctactcatgtg
catgaagcagttccagagcgaggaggcagggagattataccgatacaagaaaatagccat
gaggcatcaagaaagcatgaacatactttagagcgtctgagaagtctggaagaagatttg
gcgaagtccaagaatgacctcatttcattgcgatctgatcgtgatagattggaaacggta
gcaatgtttgcagaagaaaaacttggcaggtttatgaaggagtttgagcaacagagggaa
gagcataatggaattagagcaagaaatgttgagttctctcagataatagtggactaccaa
aggaaactccgtgaaagtgcagagtccttggatgctgccaatgaactgtctcgcaagtta
acaatggaggtatcaattttgaagcaagaaaaggaaatgcttcagaactctgagaaaaga
gcttctgatgaagtttgtagtttgagtcagagggttcatcgacttcaggccactttggac
accatgcagagtgcagaggaagtgcgtgaggaggctagaggtgttgagaggagaaaacaa
gaagattatgcaaacaaaattgagagagaatgggctgaggcaaaaagagaacttcaggaa
caacgagatcttgttcgaagcctttctcttgaccatgggagtagtttgaaggatgctcat
aaacaaattgatgaattgaacaaagaattggctaattctttgagatctgtggcaaatgct
gaatctagagcagcaattgcagaggctcgatattctgatctggagaagattatggaatct
acaaggacaaagggttctgacggtgttgatagtggaccttcttcttcttctgaaaagatg
ctggccaagtttagggatgaaatcgagaaattaagggaggaagcagaggcaagcaaaaat
cacatgcttcagtacaagagcatcgctcaagtaaatgaagaagccctcacacagttggag
ttggcccatgagaattttaagaaagaggctgatgaagttaagaagtcactagaaaacgag
attcatttgctcagggagcatgttaatgaacttgagagtgaatgtaagctaaagactgag
gaagcaaattctgcaacttctgggaaagaagaggctcttgctggtgctttatctgagatt
gctagtgtaaaggatgcgttttctgttaaaatatcacagattgtagtcatggaatcccaa
atctctacattgaaagaagacttggagtcggagcataagaaatggcgaattgctcaagac
aactatgagagacaggttattctacaatcagaaactattcaagagttgacgaaaacatca
caagccttggattcggcacaaaaagaggcatctgagctccgtaaagtggtagatgtgcta
aagacagaaaatgtggagcttaagtcaaagtgggagacagaaaagttggccattgaagta
tataggaacgaagcagacaagaagtacactgaaattaacgaactaaacaagattttgcac
agtcaacttgaagccttgcacattaagttggctgagaaggaaaagggaatagcttctgga
agcagttctaagaaccttgggggtgatgatgggttgcaaagtgttgtgaactatctccga
cggtcgaaggaaatagctgaaacagaaatctcattattgaaacaagaaaagcatcgcttg
caatctcaattagagagtgctttgaagtcagccgagtctgcacagacattgcttcaggca
gagcgaggaaaatcgcgtgcatcgttgcttacagatgaagagtttgaatctcttcaacta
caggtcagagagataactttactgcgtgaaagcaatgtgcaactcagagaggaaaatcgg
cataattttgaagaatgcctgaaacttcgtgaagcatttcagaatgctaaaattgaaatt
gagaatttggagaagcttctaagagaaagagacagagagttggaagcgtgtagaaaagaa
attgaaatcttgaaggaagagaaaatggatcttgaaaagagaattgccgagttggtacag
aaatgcaaggatgttgatgtcaatgattataatcagttgaaggaatcttccaagcagatg
cagatgagcttagcggaaaaggatagtcagctggaggaggttaagaagcttttattagaa
aagcaggaaacagtatcaattctagagcgagacctagctagaagcaaaacagaagtgagt
gaacgagagaacaagattgatgaagtctcacaaactgaagcttctcagaaatccgagatt
gatagacttaagcggaattatatgcaagcaagaaggaagtttgaaaatcttgtaaaggaa
aaagatgagatgagcaaagaggtccagtctttgtccaaacaattagaggaggctaggcaa
gccttgtccaaacaactggaggaggctaaacttgtaaaacgaaatactgtcgattctgga
gaacagcaaaaggagaaagatacgaggatacaaattctagaaagaactgtggagaggcaa
agagatgatctgaggaaagaaaaagaagatcaccataaagaaaaacaaaaatttctaaag
attcggaaaacaataatcgagtctcatgaaaatgtcacgcaagaaaagaggagaatcact
gacgaccttacaaagcataaacaagctttgaaagctcttcaagatgaagtggaaaaaata
aagaatcctggtagcagtcaatcagaaagtgcatctagtaatatattggatgattttgct
tctgcctatttcctggctgtagataattttgaacaattagcacagccagcttttagtgtc
cctgactctaccacgacagatgctccacctcttgataatgcaacatctgttgcagttccc
accggtcaagcagtaccatcgtttcaaacccctgaacctcctgctgccagtgttcctgca
gcaagagctgaggagaaagagaaaagacctgctttaacaaaggcaaaccttaaaatggga
aggaagctggttcgtcctaatattacgaagcctagggaacctcaaggtgatgtggagatg
accgaaggagatgaatctaataccggattaccatcccatagtacagagactcagggaact
gtaagtgctcccgcaacagcatctgcacgtaaacgaatgcaagatgagatgctcaataca
gaagagactacctctgatgtcccagcaccgttgcataaaaagtcaaaagctccagatagc
ctacaggtgggtggtgacgaactagctgctgctcccacaaagctacctgaagctgttatc
actgaagaatcatcagatgatatgggaaaccttcaacaaattaaggaagaagttgttgaa
aaggatgagcttgacactgtagaagatcaaactgtagaaccattagcagatgaagagttc
agtgaaccagttgatgctgcagatgaaaaattggagaaaccaagcgacattatgctatct
gatgatcagctgagagatcaaaccgaactagatattcaacgcatagttgcagagtcaggt
ggtgagaaagaagagggagaggtggttggagattttgctgataatgatggtgatagcagt
gcaatcaatgagacaggaggaccaggaaatggagaattacaaggcgaacaatcaacggac
cctgagaaatcacctagtattgaaccattgggcctggaagctggggagattgatacatcc
gatacactagaggatgagaagataggtgacttaaatgagaccataactgacaattctgat
aagcttatccatggtgcagattctggtgcagaaatcgacagggcacctggttcgtccaat
cctccctctgaggaagcatcaatcagcactactgttgctattgttgatgttggtccttcg
gatcaacctggatcgacgcccccacaggacagtggtgcaaaacccgtgtcacctctgaac
agtggtggatcgactcccccacaggacagtggggcaaaacccgtgtcacctctgaacagt
ggtggatcgactctcccacaggacagtggtgcaaaacctgcgtcacctctgaacagtggt
gcaacaaccattaatctacaggagagagcaaggcagcgagcacacctgaggcaggctggc
atgggaggggttacttcttcaccaggaagagctcgtggccgaacaattcgtggtcgtggt
gtacgtggtggacgcactggacgtggacaatcccctggttaa
DBGET
integrated database retrieval system
