Salvia splendens (scarlet sage): 121809658
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Entry
121809658 CDS
T07627
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121809658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121809658
03051 Proteasome [BR:
sspl03051
]
121809658
Membrane trafficking [BR:
sspl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121809658
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121809658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
UBA_NBR1_C
Rad60-SLD_2
RAWUL
Ubiquitin_5
UBA_HOIP
Fungal_trans_2
Motif
Other DBs
NCBI-GeneID:
121809658
NCBI-ProteinID:
XP_042066341
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All DBs
Position
6:complement(25289499..25294326)
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AA seq
539 aa
AA seq
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MAADSDSTAGVAAIQDVNVNIRCSNGSKFSVKTTLELTVAEFKGVLAHNCDVPAEQQRLI
YKGRILKDDQTLASYGLQADHTIHMVRGSAPAAASSPAAVPTDAGNTNTTSATQGGGVNP
GGTGVGTGASLFPRLGLGGLGGTGGASGLFGAGLPEFEQVQQQLTQNPNMMRDIMNMPAI
QSMMNNPEIMRSLIMSNPRMREIIDRNPELAHILNDPSVLRQTLEAARNPDLMREMMRNT
DRAMSNIESSPEGFNMLRRMYENVQEPFLNATTIGGNAASDAGSNPFASLLGNQGGLQNR
DGANSTSATETGTTVPNVNPLPNPWSNTGGSQTTNATRPNLTGDTRPPPITGLGGLGLPD
LEGTGMNDPAAFGQLLQNPAVSQMMQNLLSNPQHMEQLMGLNPQLRSMFDTNPQLREMMQ
NPELIRQLTSSDMMQQMMALQQQLNRLRSTPDGDQANQNRGTQNNMGLDMLMNMFGGLGA
GGFAVPNAPDGPPEEVYATQLSQLQEMGFFNTEENIRALRATSGNVHAAVERLLGSLGQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgattcggactctactgcgggggttgcggcgattcaggacgtgaacgtaaac
atccgatgctcaaacggctctaaattttcggtgaaaaccaccctcgaattgacggtcgca
gaattcaaaggtgttttggcgcacaattgcgatgttcctgctgaacagcagcgtttgatc
tacaaggggcggatcttgaaagatgaccaaaccctagccagttatggtttgcaggcagat
cacactattcacatggttcgtggttctgcaccagctgctgcgtcttctcctgctgccgtt
cctactgatgctgggaacaccaacactacttctgcaactcaaggtggtggtgtgaatccc
gggggcactggggtgggtacgggtgcatccttgtttccaaggcttggcttaggcggacta
ggtggtactgggggggcatctggattatttggagctggacttccagaatttgaacaggtg
cagcaacaactaactcaaaatcctaacatgatgagggatataatgaacatgcctgccatt
cagagtatgatgaacaaccctgagattatgcgcagcttaattatgagtaaccctcgaatg
cgcgagataattgatcggaaccctgaacttgctcacatattgaatgatcctagtgtcctt
cgacaaacattggaagcagcaaggaaccctgacctaatgcgtgaaatgatgcgaaacact
gacagagcgatgagcaacattgaatcgtctcctgagggattcaatatgctcaggcgcatg
tacgaaaatgtgcaagaacccttcctgaatgcaacaaccataggtggtaatgctgcatct
gatgctggatctaatccatttgcatctctcctcgggaaccaaggaggcttgcaaaataga
gatggagctaattcaacaagtgcaactgaaacgggaacaactgttccaaatgtcaatcca
cttcccaatccatggagcaatactggaggttctcaaacaaccaatgctaccagacctaat
ctaactggagatacgaggccacctccaattactggactgggaggacttggtcttcctgat
ttagagggtaccggcatgaatgatcctgctgcatttggtcagctgttgcaaaatccggct
gtgtctcagatgatgcagaacttgctttccaaccctcaacacatggaacaactcatgggt
ctgaaccctcaactgcgaagcatgtttgatacgaaccctcaattaagagaaatgatgcaa
aacccagaacttattcgacagttgacctcatctgatatgatgcagcaaatgatggctttg
cagcaacaacttaatcggctgcggtcaaccccggatggagaccaggctaatcaaaataga
ggaacacaaaacaatatgggtttggacatgctgatgaatatgtttggtggactcggagct
ggtggctttgcagttcctaatgcccctgatgggcccccagaagaagtgtatgcaactcaa
ctatcacagctacaagagatgggtttcttcaacacagaagagaacatccgagcactccgc
gccacttcaggaaacgtgcatgcagctgtcgaacgacttctaggaagcctcgggcaatag
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