Salvia splendens (scarlet sage): 121809701
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Entry
121809701 CDS
T07627
Name
(RefSeq) DNA mismatch repair protein MSH7-like isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121809701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121809701
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121809701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
121809701
NCBI-ProteinID:
XP_042066393
LinkDB
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Position
6:complement(13955285..13964322)
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AA seq
1059 aa
AA seq
DB search
MQRQKSILSFLKKPEPSTGAKPAVSDAEITGTDTPPEKVPRRIFPDSRPSLFSTIQHKFA
KPHSSTRCDGGENFIIQSLPLGFDASEDSGNGHLVVSKHPSEQHALNSSRTVFPGGDKGS
LLLNNLEDDLPGPETPGMRPLVPRVKRVHEDVCDFEAKADFSLQDNRKRMKLEQASGVSK
KIHDEDSDTISKFEWLHQSQIKDANGRKPANPLYDKRTLYIPPNALGKMSASQKQYWDVK
RQYMDVILFFKVGKFYELYEIDAEIGHKELDWKITQSGVGKCRQVGVSESGIDDAVQKLI
ARGYKVGRIEQLETSEQAKSRGSTSVIRRKLVHVQTPATTSEGNIGPDAVHLLAIKEGRM
LEDGSILFGFAFVDCAALKFWVGSIRDDASYAAVGALLMQVSPKEIIYEGQGLSKDAQRA
LKKLNLTGSTSFQLNASDACGDAFEVRSIIDANKYFAGSSDSWNQVLDGVVHCDLALCAL
GGLISHLSRLMLNDVIRNGDIFSYEVYKGFLRMDGQTLVNLEIFNNSADGSQSGTLYKYL
DNCITSSGKRLLKNWICHPLQDVDKINNRLDVVENMMADSEIVSHIAQLLRKLPDVERLL
GRVKSSFQSSYVLSLPLLGSKLLKQRLKAFGSLVRGLRIGMEMLMLLQNNDVMTASLSKV
ITVPVLSGSGGLDEYLSQFEAAIDSEFPNYQDHNVSDSEAETLTILIELLVEKAARWSQM
IHAINCIDVLRSFAISAISSCGAMCRPNVLSHATVTNSLTATNPILHMEGLWHPYALDEN
GGAPVPNDIILGEDGSSCTPVTLLLTGPNMGGKSTLLRATCLAVVLAQLGCYVPGRTCTL
SVVDIIFTRLGATDRIMTGESTFLIECRETASVLQNATKNSLVILDELGRGTSTFDGYAI
AYAVFRHLVESVNCRLLFATHYHPLTKEFSAHPRVKLQHMACCFDRTSDTSSEVDQKLIF
LYQLASGACPQSYGMQIAAMAGIPNTVVRAASKARQVMKEIVGESFKSSEQRENFSTLHE
EWLKSILSISKTKETDFDDDAFDFLFCLWHELKRSFKEN
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgacagaagtccatactctcattcctcaagaaaccggagccctccaccggagcc
aaacccgccgtttccgacgcggaaatcacaggaaccgacactccgcccgagaaagtgccc
cgtcggatatttccggacagccgtccttctctcttctccaccattcagcacaagttcgct
aaacctcacagctccaccaggtgtgatgggggtgaaaattttattattcagtctctcccc
cttgggtttgatgcatcagaggattcaggaaatggacatttggtggtctccaagcatccc
agtgaacaacatgctttaaattccagcagaacagtgtttcctggaggggacaaaggttct
ttgctcctaaacaatttggaggatgaccttcctggcccagagacgccaggcatgagaccg
cttgttcctagggtaaagcgagtgcatgaggatgtctgtgattttgaggctaaggctgat
ttttctttgcaagataataggaaaagaatgaaacttgagcaagcttctggtgtttcaaag
aaaattcatgatgaggactcggatacaattagcaagtttgaatggttgcatcaatcccaa
atcaaggatgccaatggaagaaagccagcaaaccctctttatgataagaggacactttac
atccctcctaatgcactgggaaagatgtcagcatctcaaaagcaatactgggatgtcaaa
cgccagtatatggacgtgattctcttttttaaagtgggaaagttctatgagctctatgaa
atagatgctgaaatcggtcataaggaactcgattggaaaataacacaaagtggtgtcggg
aagtgtcgacaagttggtgtatctgagagtggaattgacgatgctgttcagaagttgata
gctcgtgggtacaaggttggtcgaatagaacagttggaaacctcagagcaggcgaaatct
aggggctctacatctgtcattcgaagaaagttggttcatgtgcaaactcctgctaccact
agtgagggcaatattgggcctgatgcggttcatcttcttgctataaaggagggtcgtatg
ctggaagatggttcaattctgtttgggtttgcatttgttgattgcgctgcattaaaattt
tgggttggttctatcagggatgatgcttcatatgcagcggtgggggctttgttaatgcag
gtgtctcctaaggaaattatttatgaaggacaagggctgtctaaagatgctcaaagagct
ctcaagaagttaaatttgacaggatcaacttcattccaattgaatgcaagtgacgcttgt
ggagatgcctttgaagttagaagtattattgatgcaaacaagtactttgctgggtcttct
gattcatggaaccaagttcttgatggagttgtgcactgtgatcttgcgttgtgtgccttg
gggggacttattagtcatctatcaagattgatgttaaatgatgtcattcgcaatggagat
attttttcttacgaagtttataagggtttccttagaatggatggtcagactctggtaaat
ttggagatctttaataatagcgcggatggtagccaatcaggcactctgtacaagtatctt
gataattgcataacttcatctgggaaacggctcttaaagaattggatatgtcatcccctt
caagatgtagataaaataaacaataggcttgatgtagttgaaaacatgatggctgattca
gaaatcgtctcacacattgcccaattacttcgcaagcttccagatgtggaaaggttactc
ggacgtgtaaagtcgagctttcaatcttcttatgtactttcattgcccttacttggtagc
aagttactgaaacagcgactaaaagcttttggatctcttgtaagaggactgcgaattgga
atggaaatgctaatgctattgcaaaacaatgatgtcatgacggcatcattatcaaaagtt
ataactgttcctgttctaagtggcagtggggggcttgatgaatacctttctcagtttgaa
gcagcaatagatagcgaattccccaattaccaggaccataacgtttcagactcagaggct
gaaacattaactattttgattgagttacttgtcgagaaggcagctcggtggtctcaaatg
atacatgccataaattgcattgatgtattaagatcttttgccatatctgcgatttcttct
tgtggagcgatgtgtcgacctaatgttttgtcccacgccaccgttactaactcactcacg
gcgacaaacccaatacttcatatggaagggctatggcatccttatgcccttgatgagaat
gggggggcacctgtgcccaatgacattattcttggagaagatggtagtagttgtactcca
gtgacattgttattgaccgggccaaatatgggtgggaagtcaacactcttgcgtgcaact
tgtctggctgttgtactggcacagctaggttgttatgtgccgggcagaacatgcactcta
tcagttgtcgacatcatatttacccggcttggtgcaaccgatcgtattatgactggcgag
agtaccttcctaattgagtgcagagagacagcatcagttttgcaaaatgctactaagaat
tcactggttattcttgacgaattgggtcgagggactagtacttttgatggatatgctatt
gcctatgctgtgtttcgtcatcttgtggagtcagtcaactgccgattgttatttgcaaca
cattatcaccctctgacaaaggagttttcagcccatcctcgtgtaaaactgcaacatatg
gcatgctgttttgatcggacttctgacacatcatcagaagtcgaccaaaagctgattttc
ctctaccagctggcctctggagcgtgcccacagagttatggaatgcaaatagcagctatg
gctggaattccaaacacagtggttcgagcagcctcaaaagcaagacaagtcatgaaagaa
attgtgggagaaagcttcaagtcaagcgagcagagggagaatttctcgacattgcatgaa
gagtggctgaaatcaattctatctatttcgaagacaaaggaaactgattttgacgacgat
gcgtttgatttcttattttgcctgtggcatgagctgaaaagatctttcaaggagaactga
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