Salvia splendens (scarlet sage): 121809837
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Entry
121809837 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32-like isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121809837
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121809837
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Helicases
121809837
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
121809837
NCBI-ProteinID:
XP_042066577
LinkDB
All DBs
Position
6:complement(10602908..10608387)
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AA seq
767 aa
AA seq
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MRAPKSRKFKLQKRLTEVQEIELLESWIDSCKPDAGSNPLSLSPPSKKSPIGRLPDGSFS
PYAGADKFFQLPLSKRTKDGLAASDYTKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF
VIPVLEKLYRARWGPEDGVGCIIMSPTRELAGQLFEVLKNVGVHHGFSAGLLIGGRKDVG
EEKERVNGLNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDVGFKKELNAIISQ
LPKQRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNRLDQTAMIVPLEQKLD
MLWSFIRTHLNSRILVFLSSCKQVKFVHEAFKKLRPGIPLKCLHGRMKQDGRMGIYASFC
EQHSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYLSGGRSVLFLAPS
ETKMLDKLQEKKIPIRIIKANTKRLESVSGSLAALLVKYPNLQSLAQRAFITYLKSIHKQ
RDKDIFDVTKLPIDEYSASIGLPLTPRVRFLKQKVKGKKVSEDLALVPESQSDVNPSELL
RGTVNAVKPEKEEIELEESFLLEKEAQLELKDSGLLEKKAQLFGEENETDIRDDLNATRV
LKKKKLKINMHRPVGTRVVFDDEGNTLPPLATLADSNAGSDSVKLDKDKVSQRYAELREM
MKVVDKEDKAIEHKRRKEKRIKQNMKLKRGREEEEDDDDDDDEVSDDDLSGSGRESTMNR
PNKKGKKYFKSDSDNEDDERGKGENNTAPITLAEQEELALKLLSSMQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacccaaatccaggaaattcaagctccagaaacgcctcaccgaggtccaagaa
atcgagctcctcgaatcatggattgattcctgcaaacccgacgccggctctaaccctctc
tccctttctccgccatcgaagaaatcgcctatcggcaggcttcctgacggctccttttct
ccctatgccggcgccgacaagtttttccaactgccgctatccaagaggaccaaggatggt
ttggccgcctctgattacacgaaaatgaccgacattcagagggcttctctacctcattcc
ctatgcggcagagatatcttgggagctgctaaaaccggctccgggaagactttagcgttc
gttatcccggttttagagaagctgtatcgagctagatggggaccagaggatggggtagga
tgcatcatcatgtctcctacaagagaattagctggacagctttttgaagttctaaaaaat
gtaggagtgcaccatggatttagtgctggccttttgattggtggtcgtaaagatgttggc
gaagaaaaagagcgtgttaacgggttgaacattttggtctgtactcctggcagacttctc
caacacatggatgaaactccaaattttgaatgttcacaactccaggttttagttcttgat
gaggcagatcgtattcttgatgtgggattcaagaaagaattaaatgctataatatctcaa
ctaccaaaacaaagacaaaccttccttttctcagcaactcaaacaaagtctgttcaagat
cttgcaagactcagtctgaaagacccagaatatcttagcgtgcatgaggagtctactaca
gctactcctaatcgtttggaccagactgctatgattgttccccttgaacaaaagcttgac
atgctttggagttttataaggacacaccttaattcaagaattttggtatttctttcaagc
tgcaagcaggtaaaatttgtgcatgaagctttcaagaaactccgaccaggaattccgctg
aaatgtcttcatggaaggatgaagcaggatggacgtatgggaatatatgcatcattctgt
gagcaacactctgttttgttttccactgatgttgcatctagagggcttgatttcaacaag
gctgttgactgggttgttcaggtagattgcccagaagacgttgcttcttacatacacagg
gtcgggagaactgctcgttacctttcaggtgggagatctgtgttattccttgcaccctca
gagacaaagatgcttgacaaattgcaagaaaaaaagattcctattcgaatcattaaggca
aatacaaaaagattggaatctgtttctggttcattggcagctttgttagtcaagtatcct
aatctacagagtctagcccagagagccttcattacttatttgaagtccatccacaaacag
cgcgataaggacatttttgatgtcacgaaacttccaattgatgaatattctgcatcaata
ggtcttcccctgactcccagagttcggtttcttaaacaaaaagttaagggcaaaaaagtt
tctgaagatcttgccctggtgccagaaagccagtctgatgtgaatccttctgaactctta
agaggaactgtgaatgcagtaaagcctgagaaagaagagattgagttggaagagagtttt
cttttggaaaaggaagcacagcttgaattgaaagatagtggtctgttggaaaagaaagca
cagctttttggagaagaaaatgaaactgatattagagatgatctgaatgctacaagggtc
ttgaagaaaaagaagttgaagatcaatatgcacaggcctgtgggtactagggttgtattt
gatgatgaaggaaacaccttgccgcctcttgcaacattagctgactccaatgctggatca
gattctgtcaagctggacaaggacaaagtaagtcaacgatatgcagagttgagagaaatg
atgaaagtggtagataaggaagataaagccatagagcacaagcgtcggaaggaaaagcgt
atcaagcaaaatatgaaattgaaaaggggtagagaagaggaagaggatgacgatgacgat
gatgatgaagttagtgatgatgatctatctggttcgggcagagaatcaactatgaaccga
ccaaataaaaaaggcaagaaatatttcaagagtgatagtgataatgaagacgacgagagg
ggcaaaggcgagaacaacacagctccaattacactggcggagcaagaagaactggctctt
aagctgctcagctcaatgcaatag
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