Salvia splendens (scarlet sage): 121809901
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Entry
121809901 CDS
T07627
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2-like isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121809901
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121809901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
B-prop_COPA_B_2nd
eIF2A
WDR90_beta-prop_4th
Beta-prop_DCAF12
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
121809901
NCBI-ProteinID:
XP_042066678
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Position
6:complement(26886107..26889998)
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AA seq
463 aa
AA seq
DB search
MRGGTVQINWHDSKPVLACDFHPISALLATAGADYDIKIWATVSSSDQKKAPGVAYQSNL
SYHSSAVNALRFSPSGDQLASGADGGELILWKLNVTDAGEVWKVHKSLVFHRKDVLDLQW
SADGAYLITGSVDNSCIIWDANKGSVHQILDAHFHYVQGVAWDPLGKYAASFSSDRTCRI
YVNKPSKAKGVERSNYVCQHVISKAELPVPDESKSARSHLFLDETLPSFFRRLAWSPDGS
FLLVPAGTHKSTPTSELVNTAYVFSRKDVSRPALMLPGASKPVVAVRFCPMKFKLLGTTT
SSAFNLPYRLIFAVATLNSLYIYDTESIQPIVIVAGVHYAAITDIAWSPSGNFLVLSSQD
GYCTLLEFENQELGALIPISEEKQVTGDENTSLVVEESMVDVSSGSASVDSRKEKEENLL
KEKKENLLKEKDESGDVKQASPSTAAAPQAKPAKRRITPMAID
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtggaacggttcagatcaattggcacgactccaaacccgtactcgcctgcgat
ttccatccgatctccgccctcctcgctaccgccggcgccgactacgacattaagatttgg
gcaacggtttctagctctgaccaaaagaaggctcctggggttgcttaccagagcaatctg
tcataccatagttctgctgtaaatgcacttcgcttctccccgtctggagaccagttggct
tctggcgctgatggtggtgagctgattttatggaaattaaatgttactgatgctggtgaa
gtttggaaagtccacaagtctttagtgtttcatcgtaaggatgtattagacctgcaatgg
tctgctgatggggcatatctgataaccggttcagtagataattcctgcatcatatgggat
gctaataagggttctgtacaccaaattttggacgcacattttcattatgttcaaggtgta
gcatgggatccgttggggaaatatgcagcatcattcagttcagatagaacttgtcgtatt
tatgttaacaagccttctaaagccaaaggtgttgagaggtcaaattatgtttgccagcat
gtcatctcgaaggcagagttgccagtgcctgatgagtctaagtcagctagaagccatctt
ttccttgacgagacactgccatctttctttcgaagattagcctggtctccagatggatca
tttttacttgttcccgcaggtactcacaaaagtacaccaacttctgaacttgtcaatact
gcttatgtattttcaagaaaagatgtttccagacctgctctaatgcttcctggtgcaagt
aaacctgttgttgcagttcggttttgccccatgaagtttaaattgttagggacgactaca
tcttcagcatttaacctcccctatcgccttatatttgctgtggccacgttgaactccttg
tatatttatgacactgaaagcattcagccaatagtaattgtagctggagttcattatgca
gctataacagacattgcatggtcaccgtccggtaattttctagtgttatcctctcaagat
ggatactgcacactgcttgaatttgaaaatcaagaactcggcgcacttattcccatatca
gaggaaaagcaagtgacgggagatgaaaatacgagcctcgttgtagaagaatccatggtt
gatgtcagtagtggcagtgcttctgtagatagtagaaaagaaaaggaagagaatttacta
aaagaaaagaaagagaatttactgaaagagaaggatgagagtggtgatgtgaaacaagct
tcaccaagtacagcagcagcacctcaagctaagcctgccaagaggcgtattacccccatg
gctatcgattaa
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