Salvia splendens (scarlet sage): 121809959
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Entry
121809959 CDS
T07627
Name
(RefSeq) DNA damage-binding protein CMR1-like
KO
K24755
WD repeat-containing protein 76
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121809959
03036 Chromosome and associated proteins [BR:
sspl03036
]
121809959
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121809959
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121809959
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121809959
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
121809959
DSBR (double strand breaks repair)
Other DSBR factors
Others
121809959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
121809959
NCBI-ProteinID:
XP_042066757
LinkDB
All DBs
Position
6:complement(14681634..14684308)
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AA seq
499 aa
AA seq
DB search
MGSKGKMTDYERRRLENIQRNNEMLAALKVHSKLNDLSAASASASAKRTSGEIKSYKPGS
AKKPKIETPLVLRRSLRARGVPPDASTANGLDDDGVIDKQINKSRTMNSNSVPSVSPRKQ
GPIRMHDSFCGEDGLENKLSELVKGCSENVLLNGNGLISSDSVDVIKGCKSFKIGKKSWG
RVEELELKPENIARVVPGRIMSLRFFPTRDMQMVAVGNKFGDIGFWHVNGKDEDGAEIYL
YHPHAGPVSGIVIDPFSVSKMYSSCYEGFIRMMSMEKGVFDMVYHSEYCIYSIALSPHDV
NSLYFGEGKGGFNKWDVRTGKSSLSCDLHGDRINTIDFNTDTENIMATSSTDGTACIWDL
RLMKKEKTTPLKIIKHKRAVHSAYFSPSGKFLATTSYDDKVGLTSGANYESTSMVHHYNQ
TGRWISTFRGIWGWDDSSIYVGNMKRGVDVISVDEGRLVSTLQSDILSAIPCRFDPHPYN
VGVLASATSGGQVYIWTQP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaaggggaaaatgacagactatgagcggcggaggctggaaaacattcagcga
aataacgaaatgttggccgcgctcaaggtccactccaagctcaacgacctctctgccgcc
tccgcctccgcctccgccaaacgcaccagcggtgagatcaagtcgtataaacctggttcc
gcgaagaagcccaaaattgaaaccccgctagtactgcgccggtcgcttagggcacgcggg
gtgccgcctgatgcctctacagcgaatggtcttgacgatgatggtgtcatcgacaagcag
attaacaaatcccgaaccatgaattccaactctgtacccagtgtgtcccctcgaaagcag
ggaccaattagaatgcacgattcattttgcggtgaagatggattggaaaacaaactctca
gaacttgttaagggatgttccgagaatgtccttctgaatgggaatggtttgatttcaagt
gattctgttgatgttattaaaggttgcaaatcttttaaaattggaaagaaatcgtggggt
cgcgtggaggagttggaattgaaaccggagaacatagcacgagtggttcccgggagaatt
atgagtttgaggtttttcccaactcgggacatgcagatggttgctgttggcaacaaattt
ggagatatcgggttttggcatgttaatggcaaggatgaggatggtgctgaaatttatttg
taccacccacatgctgggcctgtttctggaattgtgatagatcctttttctgtatcaaag
atgtatagctcatgctacgaagggtttatcaggatgatgagcatggagaaaggggtgttt
gatatggtataccacagtgagtattgtatatactctatagcactgagtccccatgacgta
aactccttatactttggcgagggcaagggagggttcaataagtgggatgtgagaacaggc
aaatcttctttatcgtgtgatttacatggagatagaatcaacaccattgatttcaacacg
gatactgagaatatcatggctacaagttccactgatggaaccgcttgtatttgggatctg
agactcatgaaaaaagaaaaaacaaccccgcttaagatcattaagcacaaaagagctgta
cattctgcttacttttcaccttcagggaagtttctggcaactacaagttatgatgacaag
gttggtttgacaagtggagctaattatgagagcacttctatggtacaccactacaaccaa
acaggcagatggatatccacattcagaggcatatggggttgggacgactcgtcgatctac
gttggtaacatgaagagaggggttgatgtcatttctgttgacgagggaagacttgtgtca
accttacaaagtgatatcttgtcggcaattccatgccggtttgatccgcatccatacaac
gtaggtgtgcttgcaagtgccacaagtggaggtcaggtttacatttggactcagccataa
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