Salvia splendens (scarlet sage): 121810070
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Entry
121810070 CDS
T07627
Name
(RefSeq) transcription initiation factor TFIID subunit 8-like
KO
K14649
transcription initiation factor TFIID subunit 8
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121810070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121810070
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121810070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
TAF8_C
TFIID-31kDa
TAF
RP1-2
TAF10
Motif
Other DBs
NCBI-GeneID:
121810070
NCBI-ProteinID:
XP_042066902
LinkDB
All DBs
Position
6:12283632..12285501
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AA seq
349 aa
AA seq
DB search
MLPNMSNGEGKDKFLSEKENPQAMKKKKKLGEDEFAQAIAKNVVAQVCESLGFQSFQQSA
LDNLADVAMRYIREIGKTASSYANLANRTQCNVFDVIQGLEHLGSVQGFSGASDVRHCLT
RSSVVKDIIRYVSLADEIPFVYPIPAFPVVKERVLDLRVSQSEEIPRDEHIPSWLPMFPD
PATYAELSSGNEKDSETEAVKLQQVEQQNKRAERSLLNLQQKFMCNGTEAGVVVEQGDAA
KAQRAAENNPFLATPLQFGVKEVSLPTLPARIIDESMEYGYHQSHKIVENLVSVMEPSSQ
TNEAARNGPCEPEDRRMIPVNGRPIVQFTFGNVKKSLSMVTNLRNNSTR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctaatatgagcaatggagaggggaaagataagttcttgagtgagaaagagaat
ccgcaggcaatgaagaagaaaaagaagttgggggaagacgaatttgcgcaagccattgcc
aagaatgtggtggcgcaggtttgtgaaagtttaggttttcagagctttcagcagtctgca
ttggataatctcgctgatgtagcgatgaggtatattcgggaaatagggaaaactgcgtct
tcttatgcaaatttagctaataggacgcagtgtaatgtcttcgatgtgattcaagggttg
gagcatttgggctcagttcagggcttttcaggtgcttcggatgttaggcattgccttaca
agatcaagtgttgttaaagatattattcgatatgttagtctagcagatgaaatcccattt
gtgtatccgatccctgcttttcccgttgtgaaagaaagggtattggaccttagagtttct
cagtcagaggaaatcccccgtgacgaacatataccttcctggctgcccatgtttccagat
cctgcgacttatgcagagttaagttctggaaatgagaaagactcagaaacagaggcggtt
aagcttcagcaggttgaacagcagaacaagagagctgagagatctttactgaatttgcag
cagaaatttatgtgtaatggaactgaagcaggagtagttgttgaacaaggggatgctgca
aaggcacaacgagcagcagaaaacaatccatttcttgctacccctcttcaattcggggtg
aaggaggtatctttgcccactcttccagctagaattattgatgaatctatggagtacggt
tatcatcaaagtcacaaaattgtggaaaacctagtctcagttatggagccatcttcgcaa
accaatgaagctgcaaggaatggtccttgtgaacctgaggacaggagaatgattcctgta
aatgggaggcccattgtacaattcacgtttgggaatgttaagaaatcgttaagcatggta
acaaaccttcgaaacaacagcacgaggtga
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