Salvia splendens (scarlet sage): 121811037
Help
Entry
121811037 CDS
T07627
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121811037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121811037
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121811037
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121811037
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121811037
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121811037
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121811037
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121811037
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121811037
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121811037
Exosomal proteins of other body fluids (saliva and urine)
121811037
Exosomal proteins of breast cancer cells
121811037
Exosomal proteins of colorectal cancer cells
121811037
Exosomal proteins of bladder cancer cells
121811037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121811037
NCBI-ProteinID:
XP_042067726
LinkDB
All DBs
Position
7:5064441..5068108
Genome browser
AA seq
593 aa
AA seq
DB search
MASANAISTASILPSSSKQDGLKNRKVNQLLQQGQRIGKQQSRNRFVVRANAKEIAFDQK
SRSAMQSGIDKLASAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAA
LIREVASKTNDSAGDGTTTASVLAREIVKLGLLSVTSGANAVAVKKGIDKTVQGLVDELE
KKARPVKGRDDIKAIASISAGNDETIGTMIADAIDKVGPDGVLSIESSSSFETTVHVEEG
MEIDRGYISPQFVTNPEKLSVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAE
DATGEALATLVVNKLRGIVNVAAIKAPGFGERRKALLQDIAILTGAEYQATDLGLRVEDT
DIDQLGVARKITITKDSTTLIADAASKDELQSRIAQLKRELSETDSVYDSEKLAERIAKL
SGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVQAIKDK
LEDADERLGADIIQKALVAPAALIAQNAGVEGEVVVEKVRANEWEFGYNALTDSYENLVE
SGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKAPVPAGQPPAGSYSV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcaaatgcaatctctacagcctccatcctcccttcctcctctaagcaggat
ggattgaagaataggaaggtgaaccagttgttacagcaggggcagaggatcgggaagcag
cagtccaggaatcggtttgttgtgagggctaatgcaaaggagatcgcttttgatcagaaa
tcgcggtctgcaatgcagtccgggatcgataagctcgccagcgctgtcggcctcactctt
ggtcccaggggaaggaatgttgtcttggatgagtttgggtcccctaaggtggtcaatgat
ggggtcacaattgcacgcgccattgagttgcctgatgctatggaaaatgctggcgctgct
ttgattagggaggttgctagcaagacaaatgattctgccggtgatgggactactactgca
tctgttcttgcacgtgaaattgtcaaacttggcctcctcagtgttacatctggtgctaac
gcagttgctgtaaagaaaggcattgataaaaccgtgcagggtttggttgatgagctcgaa
aagaaggctaggcctgtcaagggtcgggatgatattaaagccattgcctccatctctgct
gggaacgatgagacaattgggacaatgattgctgatgcaattgacaaggttgggcctgat
ggtgttctatccattgagtcatcctcctcatttgagaccactgtccatgtagaagaagga
atggagattgacagaggatatatctctccgcaatttgtcacaaaccctgagaagctgagt
gttgagtttgagaatgctagggtattagttacagaccagaagatctcagcaatcaaggac
atcattcctttgttagagaaaactacccagttaagggcacctttactcattattgctgaa
gatgccactggagaagctttggcaactctcgttgtaaacaagctccgaggtattgtgaat
gtggctgccatcaaagcccccggattcggagaacggaggaaagctcttctccaggatatt
gctattttgactggagccgagtatcaagctactgatttgggattgcgcgtggaagacacc
gatatcgaccagcttggtgtagctagaaagataaccatcaccaaggactccacaacacta
atcgcagatgctgcatccaaggatgagctgcaatctagaattgctcagcttaaaagggag
ttgtctgagactgattctgtttacgactctgagaaacttgctgagagaattgccaagttg
tctggtggtgttgctgttatcaaagttggtgctgcaacagagactgagcttgaagaccgc
aagctccgcatcgaagatgccaaaaatgcaacatttgctgccattgaggaaggcatcgtg
cccggtggcggagctgcattggttcatctctcgacttatgtccaagcgatcaaggacaag
cttgaagatgccgatgagcggcttggtgctgatatcatacaaaaggctttagtagcgcca
gcagctttgattgcccaaaacgctggggtggaaggcgaggtagtcgtggaaaaagtgagg
gccaatgaatgggagtttggttacaacgcgctgactgattcttacgagaacttggtagaa
tcgggagtgatcgacccagctaaggtgacgagatgtgcgctgcaaaatgcagcttcagtt
gctggaatggtgctcaccacacaagccattgtcgtcgagaaagcgaagcctaaagctcca
gtccctgccgggcagccaccggcaggcagctactcagtctaa
DBGET
integrated database retrieval system
