Salvia splendens (scarlet sage): 121811246
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Entry
121811246 CDS
T07627
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121811246
04121 Ubiquitin system [BR:
sspl04121
]
121811246
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121811246
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121811246
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121811246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-Nse
Anti-TRAP
zf-RING-like
zf-RING_16
DZR_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121811246
NCBI-ProteinID:
XP_042068001
LinkDB
All DBs
Position
1:complement(7798482..7799885)
Genome browser
AA seq
333 aa
AA seq
DB search
MSLSPPRANGNGRSSNLYWCYQCHRTVRIAPEDPSSIVCPRCLGQFLYEIDMARPQPVLE
FTAFDPSPEARILEALALMLDHPLGLEDSPNERASIMGQTRVHGRRRRRHREPEEEGNES
WFRRRGPSFGEEEDDGWGPDSGIIARPRTWIILRPTGHIPANRNRPRERLVPPGVDPRNY
FTGPGLQGLIEEITQNDRPGPPPAPDSAIDAIPTIKIAQTHLETDTECPVCKEELKVGLE
ARELPCKHIFHSDCIVPWLRLHNSCPVCRHEIQTPNQTCEDESNQVHVEDRRCPRLRRLA
DMWPFRSRYRPLRPRGNGSGDHHAAESWRCNIL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagccctccaagagccaacggcaatgggagaagctccaacctctactggtgt
taccagtgccaccggacggtcaggatcgcgcctgaggacccatccagtatcgtctgtccc
cgctgcctaggccaatttctctacgaaatcgacatggcgaggccgcagccggttcttgaa
ttcaccgcgttcgatccctctccggaggcccggattcttgaagcattggccctcatgctg
gatcatccacttgggctagaggacagcccgaatgaacgggcctcaattatgggccaaaca
cgggttcatgggcggcgaagacggcgtcatagggagccggaagaggagggaaatgaaagc
tggttccggaggagaggtccttcgtttggtgaggaggaagacgacggttggggtccagat
agcgggattatagcccggcctagaacctggattattctccggccaacaggccatatccct
gcaaacagaaataggccgagagaaaggctagtcccaccaggagtagaccctagaaactac
ttcaccgggccaggactgcaagggctcatcgaggagataactcagaacgacaggccggga
ccgccaccagctccagattcagctattgatgctattccaacaattaaaattgcacaaaca
catctggagacagacactgaatgcccagtttgcaaggaagaattaaaagttgggttggaa
gcaagagagttaccatgcaagcacatcttccattctgactgcattgttccatggctgagg
ctgcataattcttgcccagtatgccgccatgaaatccagactccgaatcaaacttgtgaa
gatgaatccaaccaagttcacgttgaagacaggaggtgcccacggctgaggcggctggca
gacatgtggccattccgctctagatatcggccacttcgcccacgtggaaatgggtctgga
gatcaccacgcagctgaatcatggaggtgtaatatactgtag
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integrated database retrieval system
