Salvia splendens (scarlet sage): 121811311
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Entry
121811311 CDS
T07627
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121811311
Membrane trafficking [BR:
sspl04131
]
Autophagy
Other autophagy associated proteins
Others
121811311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_HPS5
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_IFT122_1st
EIF3I
DUF7099
Ge1_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
121811311
NCBI-ProteinID:
XP_042068082
LinkDB
All DBs
Position
7:complement(7033445..7036474)
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AA seq
440 aa
AA seq
DB search
MATISSIASHPNPNPNPNPNPNLNLISPMLQPYLEQQQERLHPDTPPDDGGSSYDAAPDT
DDRDSSAAAAANNNNPAAFSPNPNPTPIKLLHLSFNQDYGCFATGTDRGFRIFNCDPFRE
IFRRDFDGNGGGVGAVEMLFRCNILALVGGGEAPQYPLNKVMIWDDHQSRCIGELSFRSE
VRGVRLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQVAGSFVLVCPGLQ
KGQVRVEHYASKRTKFINAHDSRIACFTLSQDGNLLATASTKGTLVRIYNTHDGSLLQEV
RRGADRAEIYSVAFSPTAQWLAVSSDKGTVHVFSLKVHSGNVGSERSNSPPDTNPSATTP
GSSLSFMKGVLPKYFSSEWSVAQFRLPEGYQYIVAFGHQKNTVVILGLDGSFYRCKFEPG
SGGEMTQLEYHNFLKPEEAF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatttcaagcatcgcctctcacccgaaccctaaccctaaccctaaccctaac
cctaacctcaatctcatctcccccatgctccagccctacctcgagcagcagcaggagcgc
ctccaccccgacacgccgccggacgatggaggatcctcctacgacgccgctcccgacact
gacgatcgcgattcctccgccgctgccgccgccaacaataataaccccgccgccttcagc
cccaatccaaaccctaccccgatcaagctcctccacctctccttcaaccaggactacggc
tgcttcgccaccggcaccgatcgcggcttccgaattttcaattgcgatcccttccgcgag
atcttccgtcgcgatttcgatggcaacggagggggagttggcgccgtcgagatgctcttc
cggtgcaatatccttgcgctggtcggcggtggcgaggcgccgcagtatccgttgaataag
gtcatgatttgggacgaccaccagagcaggtgtatcggggagctgtccttcaggtctgaa
gtgcgcggggttcggcttcggagggatcgaattattgttgttctcgagcagaagattttt
gtgtacaatttcgcggatttgaagctgttgcatcaaattgagactattgcgaaccccaag
ggactctgtgcggtgtcgcaggttgcaggatcgtttgtgctggtttgtccagggctgcag
aaggggcaggtcagggtggaacattacgcatcaaaaaggactaaattcatcaatgctcat
gattccagaattgcgtgctttaccctctctcaagatgggaatttgctggctactgctagc
accaaggggacgcttgttaggatatataacacacacgatgggagtttgctgcaggaggtc
cgaaggggtgcagacagggcagaaatatatagtgtggcattctcacccacagctcaatgg
ttggcagtgtcaagtgataaaggaactgttcacgttttcagccttaaggtccattctggg
aatgtcggcagcgagaggtcaaacagccctcctgatacaaacccttctgctacgacacca
ggctcttcactgtctttcatgaaaggagtccttccgaaatatttcagctcagaatggtca
gtggctcagtttcgcttacctgaaggatatcaatatattgttgcttttggacaccagaag
aatacagtggtaattcttggcttggatggaagcttctaccgttgcaaattcgagccaggg
agtggtggggagatgacacagttggagtaccacaattttctgaagccagaagaagcattt
tag
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integrated database retrieval system
