Salvia splendens (scarlet sage): 121811473
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Entry
121811473 CDS
T07627
Name
(RefSeq) protein RAE1-like isoform X1
KO
K14298
mRNA export factor
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121811473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121811473
03036 Chromosome and associated proteins [BR:
sspl03036
]
121811473
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121811473
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121811473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_EML
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
121811473
NCBI-ProteinID:
XP_042068272
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Position
7:complement(2945615..2948757)
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AA seq
347 aa
AA seq
DB search
MSVNGAASTIANPNRSTEVVKPPSDSVSSLSFSPKANVFVATSWDNQVGCWEVQKSGNEL
STVHMGSMSHDKPVLCSAWKEDGTTVFSGGCDKQVKMWPLASGGQPVTVAVHDAPVKEVS
WIQEMNLLVTGSWDKTLRYWDLRQQSPTWVQQLPDRCYALAVQHPLMVVGTADRNIIVFD
LQKPQTEYKRIVSPLQHQTRCLAAFPDKQGFLVGSIGGRVGVHHFDKPQTDKTFTFKCHR
QGSVVYSVNSLNFHPTHHTFATTGSDGSFSFWDKDNKTRLKEMARCNQPVTCSSFNHDGS
IFGYSVCYDWSKGAEKYDPATAKTNIYLHQPLEVDVKPRLPLARGRR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaaatggcgcggcgtcgaccatcgcaaaccccaaccgttccactgaggtggtt
aaacctcctagtgattcggtttccagcctaagtttcagccccaaagcaaacgttttcgtg
gctacgtcgtgggataatcaggttggatgttgggaggtgcagaaatctggtaacgaactc
agcactgttcatatgggatcaatgtcacacgacaagccggtgttgtgctctgcttggaaa
gaagatgggacaactgtgttttctggagggtgtgacaagcaagttaagatgtggccgtta
gcatcgggtgggcagcctgttacagtggctgtgcatgatgctccggttaaagaagtttct
tggatccaggagatgaacctcttagtcaccggaagctgggacaagactctgaggtattgg
gatctgagacagcaatctccaacttgggtacaacaacttccagatcgctgctatgcactg
gcagttcaacatcctcttatggttgttgggactgctgacagaaatataatcgtctttgat
ttgcagaaacctcagactgagtataagagaattgtctcacctctccagcaccagactagg
tgtttggctgcttttcctgataagcaaggtttcttggttggttcaatcggaggaagagtt
ggtgtgcatcattttgataagccgcagacagataaaacttttactttcaagtgtcacagg
caaggcagtgtggtttactctgtcaactcgctaaactttcaccctacacatcacacattt
gctaccactggatctgatggaagcttcagtttttgggacaaggataataagacgaggctc
aaggaaatggcacgatgcaatcagccagtaacttgcagcagttttaaccacgatggttct
atctttggatattcggtttgttatgactggagcaagggggccgaaaaatatgatccggcg
acagcaaagaccaacatatacctccaccagcctctggaagtggatgttaaacccagactt
cctttagcaagaggaagaaggtga
DBGET
integrated database retrieval system