Salvia splendens (scarlet sage): 121811648
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Entry
121811648 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121811648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121811648
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121811648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
121811648
NCBI-ProteinID:
XP_042068465
LinkDB
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Position
7:24376303..24379922
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AA seq
397 aa
AA seq
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MDSFTDEAKLFIGGIGWETTEEHLRDHFSRYGEVAHAVVMRDRVTSQPRGFGFVVFSDPS
VIPSVLQQTHSIEGRTVEAKRAMSREQQQTLKTGSNSTGGNFVGSENLKSKKIFVGGLPS
TLKEDEFRGYFQDFGSVTDVVIMYDTNTGRPRGFGFISFTTEDSVDRVLQKTFHELKGKL
VEVKRALPKDAVTGVGSRGSSRGYGSNFSSNDSYNSPIGNSRMLQQTQPRNGGYHPNQPT
SGGYQQTQPASGGYPPYSVYGGASYGYAGNSNPGYGAYGGYEVGGHGSANAGYSGPAGVY
GNLGSPNTDFLKNQWSSQQAGYGASGYGQTANYGASVPWSNVSRSSASGYAQAGRPPSGA
SQFVNKGYNYNGYGDDASHAYAGGNAMHPDGSWKPES
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggactcttttaccgacgaggcgaagctcttcatcggcggcataggctgggagacgacg
gaggagcacctcagagaccatttcagccgctacggcgaggttgctcacgccgtcgtcatg
cgcgatagagtcacctctcagccccgcggcttcggcttcgtcgtattctccgatccctcc
gtcatcccctctgtcctccagcaaacgcatagcatcgaaggccgcaccgttgaagctaag
agagcaatgtcaagagaacagcagcagactctgaaaaccggaagcaatagtactggagga
aattttgtagggtctgagaatctcaaaagtaagaagatatttgtcggggggttgccttct
accttaaaagaagatgaatttaggggatattttcaagattttggtagtgtaactgatgta
gtgatcatgtatgatacgaatactggcaggccacgtggttttggtttcatcagctttacc
acagaagattctgttgatagagttcttcaaaagacatttcatgagctgaaaggcaagctt
gtcgaggtaaaacgagcactccccaaagatgcagtcacaggtgttggttctcgtggaagc
tccagaggctacggctcgaacttttctagtaatgactcatacaatagtcccattggaaac
agtagaatgttacagcaaacacaaccaagaaatggtggttatcacccaaatcaacctaca
agtggtggttatcaacagacacaaccagcaagtggtggttatcctccttattcagtttat
ggaggtgctagctatggttatgcagggaatagcaatcctggctacggggcttatggtggc
tatgaggtcggtggtcatggaagtgccaatgctggttattctggtccagcaggagtttat
gggaacctaggttcaccaaataccgatttcttgaaaaatcaatggagtagccagcaagct
ggttatggtgcctctggatatggtcaaactgctaactatggggcttctgttccttggagc
aatgtatcgaggagtagtgccagtggttatgcacaggcaggaagacctccgagtggtgct
tctcagtttgttaataaagggtacaactataatggttatggggacgatgcatctcacgcc
tatgctggtgggaatgcaatgcatcctgatggtagttggaaaccagaaagttga
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