Salvia splendens (scarlet sage): 59436048
Help
Entry
59436048 CDS
T07627
Symbol
rpoA, IQG92_pgp034
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
59436048 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
59436048 (rpoA)
03400 DNA repair and recombination proteins [BR:
sspl03400
]
59436048 (rpoA)
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
59436048 (rpoA)
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
59436048 (rpoA)
DNA repair and recombination proteins [BR:
sspl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
59436048 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
59436048
NCBI-ProteinID:
YP_009938041
UniProt:
A0A7H1KLV1
LinkDB
All DBs
Position
Pltd:complement(76081..77088)
Genome browser
AA seq
335 aa
AA seq
DB search
MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSENVSHEYSTVTGIQESAHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
IILPPYVEIVDNTQHIARLTEPINLHIGLEIERNRGYLIKMTHNFQDGSYPIDAVFMPVR
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEGSRNLIDLFIPFLYKDEENLPLE
HNQHMVPLSPFTFHDKLNKVQKNKIALKSIFIDQSELSPRVYNCLIKCNIYTLLDLMNKS
QEDLMKIEHFRLGDVKEILGILEKNFAIFLPKTKF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatcg
agaacagacagtaaacgcctttattatggtcgatttattctggctccacttatgaaagga
caagccgacacaataggcattgcgatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgtgtaaaatccgagaatgtctcccacgaatattctactgtaacgggtatt
caagaatcggcccacgaaattctaatgaatttgaaggaaattgtattgagaagtaatcta
tatggaacttgtgacgcgtctatttgtgttaggggtcctggatatgtaactgctcaagat
atcatcttaccaccttatgtagaaattgtcgacaatacacaacatatagctagattgaca
gaaccaattaatttgcatattggattagaaattgagagaaatcgcggatatcttataaag
atgacacataactttcaagatggaagttatcctatagatgctgtattcatgcctgttcga
aatgtgaatcatagtattcattcctatggaaatgggaatgaaaaacaagagatactgttt
ctcgaaatatggacaaatggcagtttaactccgaaagaagcacttcatgaaggctcccgg
aatttgattgatttatttattccctttttatataaggacgaagaaaacttacctttagag
cacaatcaacatatggttcctttatccccctttacttttcacgataaattgaataaagtc
caaaaaaacaaaatagcattaaaatccatttttattgatcaatccgaattgtctcctaga
gtttataattgccttataaagtgcaatatatatacattattggaccttatgaataagagt
caagaagatcttatgaaaattgagcattttcgcctaggagatgtaaaagagatattgggc
attctagaaaaaaatttcgcaatttttttaccaaaaacgaaattttaa
DBGET
integrated database retrieval system
