Streptomyces spinosirectus: LXH13_03715
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Entry
LXH13_03715 CDS
T08958
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00240
Pyrimidine metabolism
sspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LXH13_03715
Enzymes [BR:
sspn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
LXH13_03715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Phage-MuB_C
ssDBP
Motif
Other DBs
NCBI-ProteinID:
UIR16190
LinkDB
All DBs
Position
complement(815271..816227)
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AA seq
318 aa
AA seq
DB search
MITPAPAPNAATAVPHPRLVLTDEVREALREGRPVVALESTIISHGMPHPQNVEMAVEVE
QIIRDGGAVPATIAVLHGRPRIGLTPADLELLATAPDVTKASVRDLAYVMARGAHGATTV
AATMRLAALAGIRTFVTGGIGGVHRGAPTSFDISADLTELATTGVAVISAGVKSILDIGL
TLETLETLGVPVLTYGTEEFPAFYSRRSGFTSPMRVDSPAEIAAVMHARWDLGIPGGVSI
ANPVPEDEEVPAERMDGVIAQALTEMAKAGITGKDTTPYLLGRIVELTGGESLRTNIALV
KNNARLGAQIAVEYAKLR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgcccgcccccgccccgaacgccgcgaccgccgtcccgcacccgcgtctcgtc
ctcacggacgaggtccgcgaggcgctgcgcgaggggcgtcccgtcgtggcactggagtcg
acgatcatcagccacggtatgccgcacccgcagaacgtggagatggcggtcgaggtcgag
cagatcatccgtgacggcggcgccgtacccgcgacgatcgccgtcctgcacggccgtccc
cgtatcggactcacccccgcggatctggagctcctcgccaccgcgccggacgtcaccaag
gccagcgtccgcgacctcgcgtacgtgatggcgcgcggcgcacatggcgcgacgaccgtc
gcggccacgatgcgactggccgcgctcgccggtatccgcaccttcgtcaccggcggtatc
ggcggtgtgcaccgcggcgcgccgacctcgttcgacatcagcgccgacctgaccgaactg
gccacgaccggcgtcgcggtgatcagcgcaggcgtgaagagcatcctcgacatcggcctg
accctggagaccctggaaaccctcggggtcccggttctcacctacggcaccgaggagttc
ccggcgttctactcgcgccgcagcggtttcacctcgccgatgcgcgtggactcgcccgcc
gagatcgccgccgtgatgcacgcccgctgggacctcggcattccgggcggcgtcagcatc
gccaaccccgtgcccgaggacgaggaggtcccggccgaacgcatggacggagtcatcgcc
caggccctgaccgagatggccaaggccggcatcaccggcaaggacaccaccccgtacctc
ctcggccgtatcgtcgaactcaccggcggcgaaagcctgcgaaccaacatcgccctggtc
aagaacaacgcccgcctgggcgcgcagatcgcggtggagtacgccaaactccgctga
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