Streptomyces spinosirectus: LXH13_04440
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Entry
LXH13_04440 CDS
T08958
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXH13_04440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_04440
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LXH13_04440
DNA repair and recombination proteins [BR:
sspn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXH13_04440
Prokaryotic type
LXH13_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UIR16322
LinkDB
All DBs
Position
971625..972302
Genome browser
AA seq
225 aa
AA seq
DB search
MAPRPLHEIVEAGWAKALDPVAGRITEMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDDV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPLPGSLINIYRELHTDLGLPQPSNGDLTPWTE
QGVLLLNRALTTAPRKPGAHRGKGWEEVTEQAIRALAGRGKPLVSILWGRDARNLRPLLG
DLPSVESSHPSPMSADRGFFGSRPFSRANDLLVRQGGQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggctccacgaccgttgcatgaaatcgtcgaagcaggctgggcgaaggccctggacccc
gtcgccgggcggatcaccgagatgggtgacttcctccgcgccgagatcgccgcgggacgc
acgtaccttccggccggaccgaatgtgctgcgggccttccagcagcccttcgacgacgta
cgggtcctgatcgtcgggcaggacccgtatccgacgccgggacacgcggtgggtctgtcg
ttctcggtggcgcccgacgtgcgtccgctgcccggcagtctcatcaacatctaccgcgaa
ctgcacaccgacctggggctgccgcagccctccaacggcgatctgacgccgtggaccgag
cagggcgtgctgctgctcaacagggcgctcaccaccgccccgcgcaagccgggagcgcat
cgcggcaagggctgggaggaggtcaccgagcaggccatccgtgccctggccgggcgcggg
aagccgctggtgtccatcctgtggggccgcgacgcgcgcaatctgcgcccgctcctcggc
gacctgccgtcggtggagtcctcccatccctcccccatgtcggccgaccgcggcttcttc
ggctcgcgccccttcagccgggccaacgatctgctggtgcggcagggcgggcagccggtg
gactggcgtctgccgtga
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integrated database retrieval system
