Streptomyces spinosirectus: LXH13_06395
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Entry
LXH13_06395 CDS
T08958
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_06395
03036 Chromosome and associated proteins [BR:
sspn03036
]
LXH13_06395
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_06395
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LXH13_06395
Chromosome and associated proteins [BR:
sspn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LXH13_06395
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LXH13_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
Motif
Other DBs
NCBI-ProteinID:
UIR16686
LinkDB
All DBs
Position
complement(1379927..1380292)
Genome browser
AA seq
121 aa
AA seq
DB search
MKKKPTIITRRLTTTSLLEVVANDLGSTPAAVRPAVMATFDAIARANASGHDVAITNFVT
FVSHRVKRSTRRNPQTNETFISPAHRVVRLRVSDHLAEAVRRGDRKVTIRKAPKGTAKAA
E
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagaagcccaccatcatcacccgccggctgaccaccacgagcctgctcgaagtc
gtcgccaacgacctcggcagcaccccggccgccgtacggccggcagtgatggccaccttc
gacgccatcgcccgcgccaacgcgagcggccacgacgtggccatcaccaacttcgtcacg
ttcgtctcacaccgcgtcaagcggtccacacgccgcaacccccagaccaacgagacgttc
atctcgcccgcacaccgggtcgtgcggctgcgtgtctccgaccacctggccgaagccgta
cgccgcggcgaccgcaaggtcaccatccgcaaggcgccgaagggcaccgcgaaggcggcg
gagtga
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