Streptomyces spinosirectus: LXH13_08195
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Entry
LXH13_08195 CDS
T08958
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspn03051
]
LXH13_08195 (pafA)
Enzymes [BR:
sspn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LXH13_08195 (pafA)
Proteasome [BR:
sspn03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LXH13_08195 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UIR17014
LinkDB
All DBs
Position
complement(1754715..1756076)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFCERRGIRTGTV
EQVLELWGRTLDAIEAEDLDKIGTEIDWVMKYQLIERYRAKHNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKKGQATRICSDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgtacgttcagggga
cagcgccgcctgtctcccgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcgaaacggcgcccgcctctatctcgacgtgggctca
catccggaatacgcgacacccgaatgtgacaacgtgaccgaactggtcacccacgacaag
gccggcgaacgcattctggaagggctactggtagacgccgaacgacgcctgcacgaggaa
ggaatcgcgggcgacgtctacctcttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactatctcgtcgcgcgccacggggagttctcccggctcgcggacatc
ctcattccgttcctggtcacccgccagctgctgtgcggcgcgggcaaggtgctgcagacg
ccgcgcggtgccgtctactgcgtcagccagcgcgccgagcacatctgggagggcgtctcc
tcggcgacgacccgctccaggccgatcatcaacacccgcgacgaaccgcacgcggacgcc
gagcgctaccgccgcctgcacgtcatcgtgggcgactcgaacatgtccgagacgaccatg
ctgctcaaggtcggggccaccgacctggtgctgcgcatgatcgaggcgggcacggtgatg
cgggacctgaccctggagaaccccatccgggccatccgcgaggtcagccacgacatcacc
ggccggcgcaaggtgcgcctggccagcggacgcgaggcctccgccctggaggtgcagcgc
gagtactacgagaaggccgtggacttctgcgagcgccgcggcatccgcaccggcaccgtc
gagcaggtcctggagctgtggggccgcacgctggacgcgatcgaggccgaggacctcgac
aagatcggcaccgagatcgactgggtcatgaagtaccagctcatcgagcggtaccgggcc
aagcacaacatgaccatgtcccacccgagggtcgcgcagatagacctcgcctatcacgac
atccaccgccgtcgtggcctgtactacctgctcgagaagaagggtcaagcaacgcggatc
tgcagcgacttgaagatcttcgagggcaagtccgttcccccgcagaccaccagggcccgg
ctgcgcggcgacttcatccgcagggcccaggagcagcgccgggacttcacggtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgtgttgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctcatcgcgggaatgtga
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