Streptomyces spinosirectus: LXH13_09015
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Entry
LXH13_09015 CDS
T08958
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspn03009
]
LXH13_09015 (der)
Ribosome biogenesis [BR:
sspn03009
]
Prokaryotic type
GTPases
LXH13_09015 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
Ras
NTPase_1
AAA_16
Arf
TniB
AAA_28
ATPase_2
AAA_33
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
UIR17168
LinkDB
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Position
complement(1947987..1949465)
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AA seq
492 aa
AA seq
DB search
MNDHIHSEGSFEEHDHGELGDAEYAEFMELAAEEGFDPEDVEGAIEEAGHGPLPVLAVVG
RPNVGKSTLVNRIIGRREAVVEDKPGVTRDRVTYEAEWSGRRFKVVDTGGWEQDVLGIDA
SVAAQAEYAIDAADAVVFVVDAKVGATDTDEAVVRLLRKAGKPVVLAANKVDGQSGEADA
AYLWSLGLGEPHPVSALHGRGTGDMLDAVLEVLPDAPRETFGAGGIGGPRRIALIGRPNV
GKSSLLNKVAGEERVVVNEMAGTTRDPVDELIELGGVTWKFVDTAGIRKRVHLQQGADYY
ASLRTAAAVEKAEVAVVLIDASESISVQDQRIVSMAVDAGRAMVIAYNKWDTLDEERRYY
LEREIETEFGQVSWAPRVNVSAQTGRHMEKLVPAIETALAGWETRVPTGRLNAFLGELVA
SHPHPVRGGKQPRILFGTQAGTKPPRFVLFASGFIEAGYRRFIERRLREEFSFEGTPIHI
SVRVREKRGKKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccacatccactccgagggctctttcgaggagcacgaccacggagagcttggc
gatgccgagtacgcggagttcatggagctcgccgcggaggagggcttcgaccccgaggac
gtcgagggcgccatcgaggaggccggtcacggcccgttgcccgtcctcgccgtcgtcggc
cgccccaatgtcggcaagtcgactctggtgaaccgcatcatcggccgccgcgaggcggtc
gtcgaggacaagcccggcgtcacccgcgaccgcgtgacctacgaggcggagtggtccggc
cgccgcttcaaggtcgtcgacaccggcggctgggagcaggacgtcctcggcatcgacgcc
tccgtggccgcccaggcggagtacgcgatcgacgccgccgacgccgtcgtgttcgtcgtc
gacgccaaggtcggcgcgaccgacaccgacgaggcggtcgtacgactgctgcgcaaggcc
ggcaagcccgtggtgctggccgccaacaaggtggacgggcagagcggcgaggcggacgcg
gcctatctgtggtcgctgggcctcggcgagccgcacccggtctccgcgctgcacggccgc
ggcaccggcgacatgctggacgccgtgctcgaagtactgccggacgcgccgcgcgagacg
ttcggcgcgggcggcatcggcggtccgcgccgaatcgccctgatcggccgcccgaacgtc
ggcaagtcctccctgctgaacaaggtggcgggggaggagcgcgtcgtcgtcaacgaaatg
gcgggcaccacccgcgacccggtcgacgagctcatcgaactgggcggtgtcacctggaag
ttcgtcgacacggccggtatccgcaagcgcgtccatctgcagcagggcgccgactactac
gcctcgctgcgcaccgcggccgcggtcgagaaggccgaggtggcggtcgtcctgatcgac
gcctccgagtccatctcggtgcaggaccagcgcatcgtctccatggccgtcgacgccgga
cgcgccatggtcatcgcgtacaacaagtgggacaccctcgacgaggagcgccgctactac
ctggagcgggagatcgagaccgagttcggccaggtctcctgggcgccccgggtcaatgtc
tccgcacagaccggccgccacatggagaagctggtcccggcgatcgagacggctctggcg
ggctgggagacccgggtccccaccggccggctgaacgccttcctcggtgagctggtcgcc
tcccacccgcacccggtccgcggcggcaagcagccccgcatcctgttcggcacccaggcg
ggcaccaagcccccgcggttcgtgctgttcgcctccgggttcatcgaggcgggctaccgg
cgcttcatcgagcgcaggctgcgcgaggagttcagcttcgaggggacgcccatccacatc
tccgtgcgggtgcgcgagaagcgcggcaagaagaagtag
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