Streptomyces spinosirectus: LXH13_09085
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Entry
LXH13_09085 CDS
T08958
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspn03009
]
LXH13_09085
Enzymes [BR:
sspn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LXH13_09085
Ribosome biogenesis [BR:
sspn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LXH13_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UIR17182
LinkDB
All DBs
Position
complement(1959829..1960902)
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AA seq
357 aa
AA seq
DB search
MRSSGSGKSGGRGNYRGAGNNRDQKQGGQGGRPSKPRPEERRYDVGPGATQDGPKSGRGG
SARGGAKGGPKQSRQGGRGRTAPGTSREYEARAEERNRERYAGKKDVKLPKTFPGAEQEG
ERLQKVLARAGYGSRRACEELIEQARVEVNGEIVLEQGRRVDPEKDEVKVDGLTVATQSY
QFFSLNKPAGVVSTMEDPEGRQCLGDYVTNRETRLFHVGRLDTETEGVILLTNHGELAHR
LTHPKYGVKKTYLAAIVGPIPRDLGKKLKDGIQLEDGYARADHFRVVEQTGKNYLVEVTL
HEGRKHIVRRMLAEAGFPVEKLVRTSFGPITLGDQKSGWLRRLSNTEVGMLMQEVDL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcggcagcggcaagagcggcgggcgcggtaattaccgcggtgccggcaac
aacagggaccagaagcagggcggccagggcggtcgtccgagcaagccccgccccgaggag
cgccgctacgacgtgggccccggcgccacccaggacggtcccaagtcggggcgcggcggc
tccgcgcgcggcggcgccaagggcggtccgaagcagtcccggcagggcgggcgcgggcgt
acggcgcccggcacctcccgggagtacgaggcacgcgccgaggagcgcaaccgcgagcgg
tacgcgggcaagaaggacgtcaagctcccgaagaccttccccggcgccgagcaggagggc
gagcggctgcagaaggtcctcgcgcgcgcgggctacggctcccggcgcgcctgcgaggag
ctgatcgagcaggcccgcgtcgaggtcaacggcgagatcgtcctggagcagggcaggcgc
gtcgacccggagaaggacgaggtcaaggtcgacggcctgacggtggcgacgcagtcgtac
cagttcttctcgctgaacaagccggccggtgtggtttccaccatggaggaccccgagggg
cggcagtgcctcggtgactacgtcaccaaccgcgagacccggctcttccacgtcgggcgg
ctcgacaccgagaccgagggcgtcatcctgctcaccaaccacggcgagctggcgcaccgg
ctgacccaccccaagtacggcgtgaagaagacctatctcgccgcgatcgtcggcccgatc
ccgcgcgacctgggcaagaagctcaaggacggcatccagctggaggacgggtacgcgcgt
gcggaccacttccgggtggtcgagcagaccggcaagaactacctggtcgaggtcactctg
cacgagggccgcaagcacatcgtgcgccgcatgctcgcggaggcgggcttcccggtcgag
aagctggtgcgcacctcgttcgggccgatcaccctgggcgaccagaagtcgggctggctg
cggcggctgtccaacaccgaggtcgggatgctgatgcaggaagtcgatctctga
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