Streptomyces spinosirectus: LXH13_09165
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Entry
LXH13_09165 CDS
T08958
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspn03009
]
LXH13_09165
Enzymes [BR:
sspn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LXH13_09165
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LXH13_09165
Ribosome biogenesis [BR:
sspn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LXH13_09165
23S rRNA modification factors
LXH13_09165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_23
PrmA
Motif
Other DBs
NCBI-ProteinID:
UIR17195
LinkDB
All DBs
Position
complement(1981318..1982133)
Genome browser
AA seq
271 aa
AA seq
DB search
MAGVARRRLDAELVRRKLARSREHASQLIAAGRVTVGKTVATKPATQVETAAAIVVAGDA
GDPDYVSRGGHKLAGALEAFVPRGLVVEGRRALDAGASTGGFTDVLLRSGAAHVVAVDVG
YGQLAWSLRSDERVTVKDRTNVRELTLEAIDGEPVDLVVGDLSFIPLGLVLPALVRCVKP
DADLVMMVKPQFEVGKERLGSGGVVRSPQLRAEAVRGVAHKAWDLGLGVNGVTASPLPGP
SGNVEYFLWLRAGAPELDPADVDRAVAEGPR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggagtcgcacgccgccgtctggacgcggagctggtccgccggaagctggcgcgc
tcgcgcgagcacgccagccagctgatcgcggccgggcgggtcaccgtcggcaagaccgtc
gcgaccaagcccgccacccaggtggagacggcggcggcgatcgtcgtcgccggcgacgca
ggcgatcccgactacgtctcgcggggcggccacaaactcgccggggcgctcgaggccttc
gtgccgcggggactcgtcgtcgaaggacggcgggcgctcgacgccggcgcgtccaccggc
ggcttcacggacgtactgctgcggtcgggcgccgcacacgtcgtcgccgtggacgtggga
tacggacaactcgcctggagtctgcgcagcgatgaacgcgtcaccgtcaaggaccgtacg
aacgtacgcgagttgacgctcgaagcgatcgatggggagcctgtggatctagtcgtgggg
gatctgtcgttcatcccgctcggcctggtactgcctgccttggtgcggtgcgtgaaaccg
gacgccgacctggtgatgatggtcaagccgcagttcgaagtggggaaggaacggctcggc
agcgggggtgtcgtacggagtccgcagctgcgggcggaggccgtgcgcggggtggcccac
aaggcgtgggacctggggctcggggtgaacggtgtcaccgccagcccgctgcccggaccg
tccgggaatgtcgagtactttctgtggctgcgggccggggcacccgaactggacccggcc
gacgtagaccgtgcagtggcggaggggccgcgttga
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