Streptomyces spinosirectus: LXH13_09740
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Entry
LXH13_09740 CDS
T08958
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00040
Pentose and glucuronate interconversions
sspn01100
Metabolic pathways
sspn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LXH13_09740
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LXH13_09740
Enzymes [BR:
sspn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LXH13_09740
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Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
UIR17299
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Position
complement(2102901..2104214)
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AA seq
437 aa
AA seq
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MRTQICHGRVIASLVGCTALVLGVTGTAAAHDQHRDPARQVLGANDGWGSYGTGTTGGAA
ADAAHVYTVTDWDGFKAALADGGSAPKIIKVKGVIDADGPSCDSFQVPGYDFDAYLATYD
PAVWGHDKTLDDEPDDSPEGLRRASAANQDAYIKATVPANTTIIGVGRNAGFNGASLQIK
DVDNVIVRNLAFESPLDCFPQWDPTDTADGNWNSEYDSAVVYGSTHVWMDHDTFTDGDHP
DSTLPSYYGRIYEQHDGELDIVKGADYVTASWNVFEDHDKTILIGNSDSASTAAVDRGHL
KVTFHHNLFSNLVERAPRVRFGQVDSYNNHFVAKDGYGYSYGIGMESQLVAQHNAFTLPD
GIGAGTILKRWNDSPLTADDNYVNGKRVDLIAVHNAEVPTEILRSGAGWTPTLRTRIDPV
RAVPGIVDHRAGAGRLH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtacacagatatgtcatggacgcgtcatagcgtcgctcgtgggatgcaccgccctg
gtgctcggcgtgacgggcacggccgccgcgcacgaccagcaccgtgaccccgcccggcag
gtgctgggcgcgaacgacggctgggggtcctacggcaccggcaccaccggcggcgcggcc
gccgacgccgcacacgtctacaccgtcaccgactgggacggcttcaaggccgccctggcc
gacggcggcagcgcaccgaagatcatcaaggtgaagggcgtcatcgacgccgacgggccg
agctgcgactcgttccaggtgccgggctacgacttcgacgcctatctcgccacgtacgac
cccgcggtgtggggtcacgacaagaccctggacgacgagcccgacgacagccccgagggc
ctgcgccgcgcctccgccgccaaccaggacgcgtacatcaaggccaccgtgcccgccaac
accaccatcatcggggtcggcaggaacgccggcttcaacggcgccagcctgcagatcaag
gacgtcgacaacgtcatcgtgcgcaacctcgccttcgagagcccgctcgactgcttcccg
cagtgggacccgaccgacaccgccgacggcaactggaactccgagtacgacagcgcggtc
gtctacggctccacgcacgtgtggatggaccacgacacgttcaccgacggcgaccacccc
gacagcacgctgccgagctactacgggcggatctacgagcagcacgacggcgagctcgac
atcgtcaagggcgccgactacgtcacggcctcctggaacgtcttcgaggaccacgacaag
acgattttgatcggcaacagcgacagcgcctccacggccgccgtcgaccgcggccacctc
aaggtcaccttccaccacaacctgttctccaacctggtggagcgggccccgcgcgtccgc
ttcgggcaggtcgactcgtacaacaaccacttcgtggccaaggacggctacggctacagc
tacgggatcggcatggagtcccaactcgtcgcgcagcacaacgcgttcacgctgccggac
gggatcggcgccgggacgatcctcaagcggtggaacgactcgccgctgaccgccgacgac
aactacgtcaacggcaagcgggtcgatctgatcgccgtccacaacgccgaggtgccgacc
gagatcctgcggtccggcgcgggctggacgccgaccctgcgcacccggatcgacccggtc
agggcggtccccgggatcgtcgaccaccgcgcgggcgcgggccgcctgcactga
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