Streptomyces spinosirectus: LXH13_10160
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Entry
LXH13_10160 CDS
T08958
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LXH13_10160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_10160 (uvrA)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXH13_10160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LXH13_10160 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
UIR17378
LinkDB
All DBs
Position
complement(2191534..2194563)
Genome browser
AA seq
1009 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPQCGRPISRQSPQAIVDRVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGETIQLSNPPTLKKQEKHTIEVVIDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIVP
DEDKSLDEGAIHPWSHGHTKDYFGRLIGALANALGFRTDIPFAGLPQRAKKALLYGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPTCEGTRLK
PIVLAVTVMGKSIAEVSAMSISDCADFLGELKLNARDKKIAERVLKEVNERLKFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGSLKGLLANAESQTGQYLSGK
KSIPLPDIRRPQDPSRRLTVHGARENNLQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSISEVLSMPIEEAMDFFEAVPAINRHLKTLNDVGLGYVRLGQAATTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLLKVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGAGGGLVVAEGTPEEVAGIPASHTGKFLREVLDADRISDGASMKAPRK
AAAKRTVAAKSAPKKTATAKTANNTATKKAAGTTKKAAPAKKTTRARTA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgcgcgtgagcacaacctgaagaatgtctcgctc
gacctgcctcgtgactcgctcatcgtcttcacgggcctgtccgggtcgggcaagtcctcc
ctggccttcgacacgatcttcgccgagggccagcgccgctacgtggagtcgctctcctcg
tacgcgcgccagttcctcggccagatggacaagccggacgtcgacttcatcgaggggctg
tcgcccgcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctccacggtcggc
accatcaccgaggtctacgactatctgcgtctgctgttcgcgcgcatcggcaagccgcac
tgcccccagtgcggccgtccgatctcgcgccagtcgccgcaggccatcgtcgacagggtc
ctggagctgccggaggggagccgcttccaggtgctgtcgccgctggtgcgcgagcgcaag
ggagagttcgtcgacctcttcgccgacctccagaccaaggggtactcccgcgcgcgggtg
gacggcgagacgatccagctctccaacccgcccacgctgaagaagcaggagaagcacacc
atcgaggtggtcatcgaccgcctcacggtgaaggactccgcgaagcgccgcctcaccgac
tccgtggagaccgccctcggcctctccggcggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcgcatgtactcggagcatctgtactgcccgtacgac
gacctctccttcgaggagctggagccccgctccttctccttcaactcgcccttcggcgcc
tgccccgactgcaccggcatcggcacgcgcatggaggtcgaccctgagctgatcgtcccg
gacgaggacaagtcccttgacgagggcgccatccacccctggtcgcacggccacaccaag
gactacttcggccgcctgatcggagccctggcgaacgcgctgggattcaggacggacatc
cccttcgcgggtctgccccagcgggcgaagaaggccctgctgtacggccacaagacgcag
atcgaggtccgctaccgcaaccggtacgggcgcgagagggtgtacacgacgcccttcgaa
ggcgccgtccccttcgtcaagcgccgacacagcgaggccgagagcgacgccagccgtgag
cgcttcgagggctacatgcgcgaggtgccctgccccacctgtgagggcacgcgcctgaag
ccgatcgtcctcgcggtcaccgtcatggggaagtcgatcgccgaggtctccgcgatgtcc
atcagcgactgcgcggacttcctgggcgagctgaagctgaacgcccgcgacaagaagatc
gccgagcgcgtgctgaaggaggtcaacgagcggctgaagttcctggtcgacgtcggcctg
gactacctctcgctgaaccgcgccgcgggcaccctctccggcggcgaggcccagcgcatc
cgcctggccacccagatcggctccggactcgtcggcgtgctctacgtcctcgacgagccg
tccatcgggctgcaccagcgcgacaaccaccggctgatcgagaccctggtccggctgcgc
gacatgggcaacacgctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgccgac
tgggtcgtcgacatcggccccggtgccggagagcacggcggcaaggtcgtgcacagcggc
tccctcaaggggctgctcgccaacgccgagtcgcagaccggtcagtacctgtcgggcaag
aagtcgatcccgctgcccgacatccgccgcccgcaggacccgtcccgccggctcacggtg
cacggcgcccgggagaacaacctccaggacatcgacgtgtccttcccgctcggtgtcttc
accgcggtcacgggcgtgtccggatccggcaagtcgacgctggtcaacgacatcctgtac
acccacctggcccgcgaactcaacggcgcgcgcagcgttcccggacggcacacgcgcgtg
gacggcgacgacctcgtggacaaggtcgtgcacgtcgaccagtcgcccatcggccgcacc
ccgcgctccaacccggcgacgtacaccggcgtcttcgaccacgtccgcaagctgttcgcc
gagacgaccgaggcgaaggtccgcggttacctgccggggcgcttctccttcaacgtcaag
ggcggccgctgcgagaactgcgcgggcgacggcacgatcaagatcgagatgaacttcctc
ccggacgtctacgtcccgtgcgaggtctgccacggcgcccggtacaaccgggagaccctg
gaggtccactacaagggcaagtccatctccgaggtcctgagcatgccgatcgaggaggcc
atggacttcttcgaggccgttcccgcgatcaaccgccacctcaagacgctcaacgacgtc
ggtctcggctacgtccgcctcggccaggccgcgaccacgctgtccggcggtgaggcccag
cgcgtgaagctcgccagcgagctgcagaagcgctccaccggccgcacggtctacgtcctc
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctgctgaaggtcctgtcg
ggcctggtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgatgtcatcaag
accgccgactgggtcgtcgacatgggccccgagggtggtgcgggcggcggactcgtcgtc
gccgagggcacgccggaggaggtcgcagggatcccggcgagccacactggcaagttcctg
cgggaggtcctcgacgccgaccggatcagcgacggtgcctcgatgaaggccccgcgcaag
gcggcggcgaagaggacggtcgcggccaagtcggcgccgaagaagacggcgacggcgaag
accgccaacaacacggccaccaagaaggcggccgggacgacgaagaaggcagcacccgcg
aagaagacgacgcgggcacgcacggcctga
DBGET
integrated database retrieval system
