Streptomyces spinosirectus: LXH13_10405
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Entry
LXH13_10405 CDS
T08958
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXH13_10405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_10405
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LXH13_10405
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXH13_10405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UIR17422
LinkDB
All DBs
Position
complement(2240804..2241496)
Genome browser
AA seq
230 aa
AA seq
DB search
MDSLTELDARVAGCTACPRLVAWREEVGRTKRAAYRDWTYWARPVPGFGPADASLAIIGL
APAAHGGNRTGRMFTGDRSGDVLYQALYDVGLANRPTAVSRDDGLALHGVRITSPVHCAP
PENKPTPGERDTCRPWLVQELKLLRPTLRAVLVLGAFGWQAALPAFAGAGWTVPRPRPVF
GHGTRVPLDGIDLFGCFHVSQRNTFTGKLTPDMLRDVLRGAGEAAGLPVK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctgaccgagctcgacgcccgggtcgcgggatgcacggcctgtccccggctc
gtcgcatggcgcgaggaggtcggccggaccaagcgcgcggcctaccgggactggacgtac
tgggcgcggccggtgcccggcttcgggcccgccgacgcctccctcgcgatcatcggcctc
gccccggccgcgcacggcggcaaccgcaccggccgcatgttcaccggtgaccgctcgggg
gacgtgctgtaccaggcgctgtacgacgtgggcctggccaaccggcccacggccgtgagc
cgggacgacgggctcgcactgcacggcgtccggatcacctcgccggtgcactgcgccccg
ccggagaacaagccaacgcccggcgagcgggacacctgccgcccctggctcgtgcaggag
ctgaagctgctgcggccgaccctgcgggccgtgctcgtgctcggcgccttcggctggcag
gccgcgctgcccgcgttcgccggggcgggctggacggtgccccggccgcggcccgtcttc
gggcacggcacgcgcgtgccgctcgacggcatcgacctcttcggctgcttccacgtcagc
cagcgcaacaccttcaccggcaagctcaccccggacatgctgcgggacgtgctgcgcggg
gcgggggaggcggccgggctgccggtgaaatag
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