Streptomyces spinosirectus: LXH13_10870
Help
Entry
LXH13_10870 CDS
T08958
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03030
DNA replication
sspn03430
Mismatch repair
sspn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXH13_10870 (dnaE)
03430 Mismatch repair
LXH13_10870 (dnaE)
03440 Homologous recombination
LXH13_10870 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_10870 (dnaE)
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_10870 (dnaE)
Enzymes [BR:
sspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LXH13_10870 (dnaE)
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LXH13_10870 (dnaE)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LXH13_10870 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UIR17507
LinkDB
All DBs
Position
complement(2339129..2342668)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGEVQTRLRLGQEEEALKAAADYQD
IFGKDRYFLELMDHGIDIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQIDTSGMFEKRD
LMPKFDIPEGYTEITWFQEEVRRGMERRFPGGIPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPSHPRYSEAGEIRSMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDLDLLSLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHPELEEPLREVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQKGARDKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAGLLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIRSRKAKGKYLSFPDYLDKVEAVACNKRTT
ESLIKAGAFDTLGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEESSEPGFGL
DVQFTEEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSHAGTNAPVVLTIPATRVTPPMVSRLGEILTHHKGDSEVRI
KLQGPTRTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaacgcgtgcaacgagatggggatgacccacatcgcg
atgtccgaccacggcaatctccacggggcgtacgacttcttccattccgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcatatgtcgcgcccgagtcgcggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgcgacgacgtctcgggttccggtggt
tacacccacaagacgatctgggcggcgaactccacgggtctgcacaacctcttccggctc
tcctcggacgcctacgcggagggctggctgcagaagtggccccggatggacaaggagacc
atctcccagtggtccgaggggctgatcgcctccaccggctgcccctccggcgaggtccag
acccggctgcggctcggccaggaggaggaggcgctcaaggccgccgccgactaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgcgacggcctgctggaaatcggcagaaagctcggcatcccgcccctggtgacg
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacacgcttctggtggccgagcagatcgacacctcgggcatgttcgaaaagcgcgac
ctcatgcccaagttcgacatccccgaggggtacacggagatcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcatccccgaggaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtcgtc
gccgatttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggttgccatgatcggcacctacggcaagatcaaggccaagaacgccatcaaggac
tccgcgcgcgtgctgggttacccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctggacggcatcaccaacccctcgcacccgcgc
tacagcgaggcgggcgagatccgctcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggtctggtccggcagatgggtgtgcacgccgccggc
gtgatcatgtccagcgagcccatcgtcgaccacgcccccgtgtgggtgcggcacaccgac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgacctcgacctgctctccctgccgctggacgaccccaagaccttcgaa
ctgctccagcgcggcgacaccctgggcgtgttccagttcgacggcggccccatgcgctcc
ctgctgcgcctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctctac
cggcccggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacaagctc
caggagatcaccccgatccaccccgagctggaggagcccctcagggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggt
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggccaagaacttcgtcctgttccagaagggcgcccgcgacaagggctacagcgacgag
gccatccaggccctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcg
cactccgccgcgtacggattggtgtcgtactggacggcctatctgaaggccaaccacccc
gccgagtacatggccgggctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tatctcaacgagtgccgccgcatgggcatcaaggtgctgccgccgaacgtcaacgagtcg
gtgcacaacttcgccgcccagggcgacgacgtgatcctcttcggcctcgaagccgtccgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaggagccgcaaggccaagggcaagtac
ctctcgttccccgactacctcgacaaggtcgaggcagtcgcctgcaacaagcgcaccacc
gaatcgctgatcaaggcgggcgcgttcgacaccctggggcacacccgcaagggccttacc
gcgcagtacgagccgatgatcgacaacgtggtggcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggaggagtccagcgagcccggcttcggcctc
gacgtgcagttcaccgaggaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctctacgtctccgaccacccgctcttcggcctggagcacgtgctgtcggac
aaggccgacgcgggcatcgcccagctcaccggaggtgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctcgggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccacggtcgaggacctcgcgggctccatcgagtgcatgttcttccccgcgacc
taccagctcgtgtcgacccaactcgtcgaggacgcggtggtgttcgtcaagggccggctc
gacaagcgcgaggacgtgccgcggctggtggcgatggaactccaggtcccggacctgtcc
cacgccggcaccaacgcgcccgtggtcctcaccatcccggccacccgcgtcacgccgccc
atggtcagccgcctcggcgagatcctcacccatcacaagggcgacagcgaggtccgcatc
aagctgcagggcccgaccaggacgaccgtgctgcgtcttgaccgccaccgggtcaagccc
gacccggcgctcttcggcgacctcaaggtgctgctcggcccctcctgcctggcgggttga
DBGET
integrated database retrieval system
