Streptomyces spinosirectus: LXH13_13800
Help
Entry
LXH13_13800 CDS
T08958
Name
(GenBank) PDZ domain-containing protein
KO
K08676
tricorn protease [EC:3.4.21.-]
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspn01002
]
LXH13_13800
Peptidases and inhibitors [BR:
sspn01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
LXH13_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S41
PDZ_Tricorn
Tricorn_C1
PD40
ANAPC4_WD40
Beta-prop_EML_2
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
UIR18047
LinkDB
All DBs
Position
complement(2981823..2985038)
Genome browser
AA seq
1071 aa
AA seq
DB search
MTEPASTASAAFPAYLRYPHVHGELVTFAAEDDIWLAPLDGGRAWRVSADDVPVSTPRIS
PDGTAVAWTSSRDGAPEVHVAPVEGGPARRLTHWGSLRTQVRGWTPDGQVLAITTHGQAS
LRRTWAHAVPLDAGPSTQLPYGPVGEVAYGPATVLLSAPMGREAAWWKRYRGGTAGKLWI
DRDGEGEFVRLHEDLDGNIEFPVWAGERIAFLSDHEGTGALYSSLADGSDLRRHTPVDGF
YARHAAGDGTRIVYASAGELWLLDDLDGAGPRRLDIRLGGQRADRRSFPLDASRWFGSAA
PDHTARGSAVAVRGAVHWVTHRSGPARALAATPGVRARLPRTFRAEGEEWVVWVTDAEGD
DALEFAPATGLAPGATPRRLAAGQLGRVLGLAMAPDGSRAAVAAHDGRVLLVERETGEVR
EVDSSADGDVSGLVFSPDSAWLAWSHPGPRPLRQLRLANTTDLSVTEATPLRFQDYAPAF
TLDGKHLVFLSNRSFDPVYDEHVFDLAFVVGDRPHLITLAATTPSPFGPQRHGRPFEAPD
KDETPDSEGTPASRIDLEGLADRIVPFPVEAARYSNLRAAKDGVLWLRHPVQGVLGSSRA
TPDDPDPRTELERYDLAQQRLEHLAADADHFAVSGDGKRVLLWTDGRLKVVPSDRRASND
DESDSNITVDLSRIRQTVDPSAEWRQMYEETGRIMRDHFWRADMSGVDWPGVLTRYRPVL
DRVATHDDLVDLLWEVQGELGTSHAYVVPRAGHRRGPRQGLLGADISRHEDGSWRIDRIL
PTETSDPDARSPLAAPGVAVRAGDAIVAVGGIPVDPVTGPGPLLVGTAGKPVELTVSPAG
GGEARHAVVVPTADEEPLRYHAWVADRRAHVHERSGGRLGYLHVPDMQAPGWAQIHRDLR
VEVAREGLVVDVRENRGGHTSQLVVEKLARRIVGWALPRGMRPYSYPQDAPRGPVVAVAN
EFSGSDGDIVNAAIKALGIGPVVGTRTWGGVIGIDHRYRLVDGTGITQPKYAFWLEGYEW
GVENHGVDPDVEVIQRPQDHAAGRDVQLDEAVRIALAALAENPAKTPPGLD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaacctgcctcgacggcatcagcagccttccccgcgtatctccgttacccgcat
gtgcacggcgagttggtgaccttcgccgccgaggacgacatctggctcgcacccctcgac
ggcggcagggcctggcgggtgagcgccgacgacgtgccggtctccacgccccgcatctcg
cccgacggcacggccgtcgcctggacctccagccgggacggcgcccccgaggtgcacgtc
gccccggtcgagggcggtcccgcccggcggctgacgcactggggcagcctgcgcacccag
gtgcgcggctggacacccgacgggcaggtcctggcgatcaccacccacggccaggccagc
ctgcgccgcacctgggcgcacgccgtcccgctcgacgcgggcccgtcgacacagctgccg
tacgggcccgtcggcgaagtcgcgtacggtcccgcgaccgtgctgctgtccgcgccgatg
gggcgcgaggccgcctggtggaagcgctaccggggcggcacggccgggaagctgtggatc
gaccgcgacggcgagggcgagttcgtacggctgcacgaggacctggacgggaacatcgag
ttcccggtgtgggcgggggagcgcatcgccttcctcagcgaccacgaaggcaccggcgcg
ctctactcctccctcgccgacggttccgacctgcgccggcacaccccggtcgacgggttc
tacgcccggcacgccgccggcgacggcacccggatcgtctacgcgtcggccggtgaactg
tggctcctcgacgacctggacggggccgggccgcgccggctcgacatccggctcggcggg
cagcgcgccgaccggcggtccttcccgctggacgcctcccgctggttcggctccgccgcg
cccgatcacactgcccgcggcagcgccgtcgccgtccggggcgccgtgcactgggtcacc
caccgctcgggcccggcccgcgcgctcgccgccacccccggcgtacgggcccggctgccg
cgcaccttccgcgcggagggcgaggagtgggtggtgtgggtgacggacgcggagggcgac
gacgccctggagttcgcgcccgccaccggcctcgcccccggcgccaccccgcgcaggctc
gcggccggacagctcggccgggtcctcgggctggccatggcgcccgacggcagccgggcc
gccgtcgccgcgcacgacggccgggtgctgctcgtcgagcgcgagaccggcgaggtccgc
gaggtcgacagcagcgccgacggcgacgtgtccggcctggtgttctcgcccgactcggcc
tggctcgcctggtcccacccgggcccgcgcccgctgcgccagctccgcctcgccaacacc
accgacctgtcggtcaccgaggcgaccccgctgcgcttccaggactacgcccccgccttc
accctggacggcaagcacctggtcttcctgtccaaccgctccttcgacccggtctacgac
gagcacgtcttcgacctggccttcgtggtcggcgaccgcccgcacctgataacgctcgcc
gcgacgaccccctcgccgttcgggccgcagcggcacggccgtcccttcgaggcgcccgac
aaggacgagaccccggacagcgagggcaccccggccagccgtatcgacctggagggcctg
gccgaccggatcgtgcccttccccgtggaagccgcccgctactccaacctgcgcgcggcc
aaggacggcgtgctgtggctgcgccatccggtgcagggcgtcctcggctcctcccgggcc
accccggacgaccccgaccccaggaccgagctggagcgctacgacctcgcccagcagcgc
cttgagcatctcgccgccgacgccgaccacttcgcggtcagcggcgacggcaagcgggtg
ctgctgtggacggacggccggctcaaggtcgtacccagcgaccggcgggcctcgaacgac
gacgagagcgacagcaacatcaccgtcgacctctcccgcatccggcagaccgtcgacccc
tcggccgagtggcggcagatgtacgaggagacgggccgcatcatgcgggaccacttctgg
cgggccgacatgagcggtgtcgactggccgggcgtcctcacccgctaccggcccgtcctc
gaccgggtcgccacccacgacgacctcgtcgacctgctgtgggaggtacagggcgaactc
ggcacctcccacgcctatgtcgtcccgcgcgccggccaccgccgcggaccccggcaggga
ctgctcggcgcggacatctcccgccacgaggacggcagttggcggatcgaccgcatcctg
ccgaccgagacctccgacccggacgcccgctccccgctggccgcacccggcgtcgcggta
cgggcaggcgacgcgatcgtcgcggtcggcggcatccccgtggacccggtcaccgggccc
ggcccgctgctcgtcggcacggccggcaagcccgtcgagctgaccgtctccccggccggc
ggcggcgaagcacggcacgccgtcgtcgtccccaccgccgacgaggaacccctgcgctac
cacgcgtgggtcgccgaccggcgcgcccacgtccacgagcgctccggcggccgcctcggc
tacctgcacgtccccgacatgcaggcccccggctgggcccagatccaccgcgacctgcgc
gtcgaggtggcccgcgagggcctggtcgtcgacgtccgggagaaccgcggcggccacacc
tcccagctggtggtggagaagctggcccgccgcatcgtcggctgggcgctgccccgcggc
atgcgcccctacagctatccgcaggacgcgccgcgcggcccggtcgtcgccgtcgccaac
gagttctccggctccgacggcgacatcgtcaacgcggccatcaaggccctgggcatcggc
ccggtcgtcggcacccggacctggggcggggtcatcggcatcgaccaccgctaccggctg
gtcgacggcacgggcatcacccagcccaagtacgcgttctggctggagggttacgagtgg
ggcgtggagaaccacggcgtcgatccggacgtggaggtgatccagcgcccccaggaccat
gcggcgggccgggacgtccagctggacgaggcggtccgcatcgctctcgcggcgctggcg
gagaaccccgccaagacgccgccgggcctggactga
DBGET
integrated database retrieval system
