Streptomyces spinosirectus: LXH13_13855
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Entry
LXH13_13855 CDS
T08958
Name
(GenBank) HAMP domain-containing protein
Organism
sspn
Streptomyces spinosirectus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
ATG17_like
GAF
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
UIR18058
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Position
2995265..2999440
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AA seq
1391 aa
AA seq
DB search
MSENSATRALEDGQNVEEIRASELRTLLAAMKAARDGDFTKVPETGHGIVAELTAAFNQI
VDRSVHFNGEVRRVKRELVRHGRLDERVSASPGQGAWTSRVNDVNQILDALVAPAANATR
VLDAVAGGDLTQRVDLHDGSRQLRGDLRRLGRAVNKMVDQLSLFTGEVTRVAREVGTEGR
LGGRAKVTGLSGSWRAVTEAVNTMASRLTAQVRDIALVTTAVARGDLTRTVTVEATGELL
ELKLTVNTMVDQLSAFADEVTRVAREVGTEGQLGGRAQVRGVSGVWKDLTDNVNFMASNL
TSQVRNIAQVTTAVANGDLSQKITVDAQGEILELKSTINTMVDQLSAFADEVTRVAREVG
TEGNLGGRAQVRGVSGVWKDLTDNVNFMADNLTSQVRNIALVSTAVAQGDLGKKITVEAK
GEILELKSTINTMVDQLSAFADEVTRVAREVGTEGNLGGQAQVRGVSGVWKDLTDNVNFM
ALNLTSQVRNIAQVTTAVANGDLSKKITVDARGEILELKDTVNTMVQQLRAFADEVTRVA
REVGTDGRLGGRAQVLGVSGVWRDLTDNVNYMADNLTSQVRNIAQVTTAVANGDLSKKID
VDARGEILELKTAINTMVDTLSSFSSEVTRVAREVGSEGQLGGQARVEGVYGTWKRLTTN
VNELASNLTTQVRAIAEVASAVAQGDMSRSITVETRGEVAELKDNINLMVSNLRETTRAK
DWLESNLARLAALMQGHRDLMEVADLLLRELTPLVNAQYGAFFLADPGADSTSLRTAVPA
KGLAFIAGYGSAQGATVETGGLPVHGLVQQAAREKKRILVEEAPPDYIKINSGLGEAAPT
SVVIIPILFEDKLLGVIELASFSRFSDVHLAFFDQFVNTIAVAINTIIANSRTESLLGES
QRLAMQLQERSDELQMQQAELQRSNAELEEKAALLATSSQYKSEFLANMSHELRTPLNSL
LILARLLSDNPDGHLTDQEVQFATTIHRSGSDLLQLINDILDLSKIEAGRMDVRPKKLPL
IKLLDYVHATFRPLTVDRGLAFEVSVGQDMPREMYSDEQRLQQILRNLLSNAIKFTASGR
VELRVSRVEDPEHLHVREGDEQVREGDEVLAFSVSDTGIGIAPEKLSVIFEAFQQADGTT
NRKYGGTGLGLSISREIAGLLGGRIVAESEPGKGSTFTLYVPVVSPGHTATGPVAEERRL
PVPQQQPVSEPFAASHEAEDAWPTPTKLEEWKAGRAGRILPGRRVLIVDDDIRNVFALTH
VLGRVGMPVLYAENGREGIETLERNPDVELVLMDIMMPEMDGYETISAIRRTSRWTDLPI
VALTAKAMPGDREKAIARGANDYVPKPVDVDLLLKVVCALLDPEDPGPGTTETVAAEPAS
GGEAAVSPTTD
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaacagtgctacacgcgcgctcgaagacggacaaaatgtggaagaaatccga
gcatcggagctgcgcaccctgctcgccgcgatgaaggcggctcgggacggcgacttcacg
aaggtgcccgagacagggcacgggatcgtggccgagctgacggcggccttcaatcagatc
gtggaccgcagtgtgcacttcaacggggaagtgcggcgtgtgaagcgggagttggtgcgg
cacgggcggctcgacgagcgggtctcggccagcccggggcagggcgcctggacgtcccgg
gtcaatgatgtgaaccagatcctggacgccctggtggccccggcggccaatgcgacccgg
gtgctggacgcggtggcgggcggcgatctgacccagcgggtcgatctgcacgacggcagc
cgccagttgaggggcgatctgcggcggctgggcagggccgtgaacaagatggtcgaccag
ctgtcgctgttcaccggcgaggtgacccgggtcgcgcgggaggtgggcacggaggggcgg
ctcggcggacgcgccaaggtgaccggtctttccggcagttggcgggccgtcaccgaggcc
gtcaacacgatggcgtcccggctgaccgcccaggtgcgggacatcgccctggtgacgacg
gcggtggcgcgcggcgacctgacccgtacggtcaccgtcgaggcgaccggtgagctgctc
gaactgaagctgaccgtgaacacgatggtggaccagctctccgccttcgccgacgaggtc
acccgcgtcgcccgcgaggtcggcaccgaggggcagctgggcgggcgggcccaggtgcgg
ggtgtgtcgggcgtctggaaggacctcaccgacaacgtcaacttcatggcgtcgaacctg
acgtcgcaggtccgcaacatcgcccaggtgaccaccgccgtcgccaacggcgacctgagc
cagaagatcaccgtcgacgcccagggcgagatcctggagctgaagtcgacgatcaacacg
atggtggaccagctctccgccttcgccgacgaggtcacccgcgtcgcccgcgaggtcggc
accgagggaaacctcggcggccgggcccaggtgcggggcgtctccggcgtctggaaggac
ctcaccgacaacgtcaacttcatggcggacaacctgacgtcgcaggtccgcaacatcgcg
ctggtgtcgaccgccgtggcccagggcgacctcggcaagaagatcacggtggaggcgaag
ggcgagatcctggagctgaagtccaccatcaacaccatggtcgaccagctctccgccttc
gccgacgaggtcacccgcgtcgcccgcgaggtcggcaccgagggaaacctcggcggccag
gcgcaggtgcggggcgtctccggcgtctggaaggacctcaccgacaacgtcaacttcatg
gcgctgaacctgacgtcgcaggtccgcaacatcgcccaggtgaccaccgccgtcgccaac
ggcgacctgtcgaagaagatcacggtcgacgcccgcggcgagatcctcgaactgaaggac
accgtcaacacgatggtgcagcagctgcgcgcgttcgccgacgaggtgacccgcgtcgcc
cgcgaggtcggcaccgacggccgactgggcggccgggcccaggtgctgggcgtctccggg
gtgtggcgggacctgaccgacaacgtcaactacatggcggacaacctcacttcgcaggtg
cgcaacatcgcccaggtgacgaccgccgtcgccaacggcgacctgtccaagaagatcgac
gtggacgcccgcggcgagatcctggagctgaagaccgccatcaacaccatggtcgacacc
ctctcctccttctcctccgaggtcacccgcgtggcccgcgaggtcggctccgagggccaa
ctcggcggccaggcacgggtcgagggcgtctacggcacctggaagcgcctgacgacgaac
gtgaacgagctggcgtcgaacctgaccacccaggtccgcgcgatcgccgaggtcgcctcc
gcggtggcccagggcgacatgtcccgctcgatcacggtcgagacccgcggcgaggtcgcc
gagctgaaggacaacatcaacctgatggtgtccaacctgcgcgagacgacccgcgcgaag
gactggctggagtccaacctggcccgcctcgccgccctgatgcagggccaccgcgacctg
atggaggtcgccgacctgctgctgcgcgagctgaccccgctggtgaacgcccagtacggc
gcgttcttcctggccgatccgggcgcggacagcacttccctgcgcaccgccgtgcccgcg
aaggggctcgcgttcatcgccgggtacggctcggcgcagggcgcgacggtggagaccggc
ggtctgccggtgcacggtctggtgcagcaggcggcccgggagaagaagcggatcctcgtg
gaggaggccccgccggactacatcaagatcaacagcgggctgggcgaggcggcacccacc
agcgtcgtcatcatcccgatcctcttcgaggacaagctcctcggcgtgatcgagctcgcc
tccttctcccgcttctccgatgtgcacctggcgttcttcgaccagttcgtgaacaccatc
gccgtcgccatcaacaccatcatcgccaactcccgtacggagtccctgctcggcgagtcc
cagcgcctggccatgcagctccaggaacgctcggacgaactgcagatgcagcaggcggag
ttgcagcgctcgaacgccgaactggaggagaaggccgcgctgctcgcgacctcctcccag
tacaagtcggagttcctggccaacatgtcgcacgagctgcgcaccccgctgaactccctg
ctgatcctcgcccgtctgctgtccgacaacccggacggccatctcaccgaccaggaggtg
cagttcgcgaccaccatccaccgttcgggctcggatctgctccagctgatcaacgacatc
ctggacctgtcgaagatcgaggccggccggatggacgtacgcccgaagaagctgccgctg
atcaagctgctcgactacgtccacgccaccttccgcccgctcaccgtcgaccgggggctc
gccttcgaggtgtcggtcggccaggacatgccgcgggagatgtactcggacgagcagcgg
ctgcagcagatcctgcgcaacctgctgtccaacgcgatcaagttcaccgcgtccggccgg
gtcgagctgcgggtgagccgggtcgaggaccccgagcacctgcatgtccgcgagggggac
gagcaggtccgcgagggggacgaggtgctcgccttctccgtctccgacaccggcatcggc
atcgcgccggagaaactttcggtgatcttcgaggcgttccagcaggccgacggcaccacc
aaccgcaagtacggcggcacgggcctcggtctgtccatcagccgggagatcgcgggcctg
ctcggcggccgtatcgtcgccgagagcgagcccggcaagggctccaccttcacgctgtac
gtccccgtcgtcagccccggccacacggcgaccggaccggtcgcggaggagcgccggctg
ccggtgccgcagcagcagcccgtgtccgagccgttcgccgcatcgcacgaggcggaggac
gcctggccgaccccgaccaagctggaggagtggaaggcgggccgggccggccggatcctg
cctgggcggcgggtgctgatcgtcgacgacgacatccgcaacgtcttcgccctcacccat
gtcctgggccgcgtcggcatgccggtcctgtacgcggagaacggacgcgagggcatcgag
acgctggagcgcaatcccgacgtcgaactcgtcctgatggacatcatgatgccggagatg
gacggctacgagaccatctcggccatccgccgcacctcacgctggaccgacctgccgatc
gtcgcgctgaccgcgaaggccatgcccggcgaccgcgagaaggccatcgcccggggagcg
aacgactacgtacccaagccggtggacgtcgacctgctgctgaaggtcgtctgcgccctc
ctggaccccgaggatcccggcccgggcaccaccgaaaccgttgcagcggaaccggcttcc
ggtggggaagccgcggtttcgccgacgaccgactga
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