Streptomyces spinosirectus: LXH13_13865
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Entry
LXH13_13865 CDS
T08958
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00061
Fatty acid biosynthesis
sspn00071
Fatty acid degradation
sspn01100
Metabolic pathways
sspn01212
Fatty acid metabolism
sspn02024
Quorum sensing
sspn04146
Peroxisome
Module
sspn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LXH13_13865
00071 Fatty acid degradation
LXH13_13865
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LXH13_13865
09145 Cellular community - prokaryotes
02024 Quorum sensing
LXH13_13865
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sspn01004
]
LXH13_13865
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspn04147
]
LXH13_13865
Enzymes [BR:
sspn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LXH13_13865
Lipid biosynthesis proteins [BR:
sspn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LXH13_13865
Exosome [BR:
sspn04147
]
Exosomal proteins
Exosomal proteins of breast milk
LXH13_13865
Exosomal proteins of breast cancer cells
LXH13_13865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
EutN_CcmL
Motif
Other DBs
NCBI-ProteinID:
UIR18060
LinkDB
All DBs
Position
complement(3000050..3001924)
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AA seq
624 aa
AA seq
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MSDTQTLIENRPPSVATLFLERVAATPDAEAYRYPVASASGAGPEEWKSLSWAQAAERVH
AIAAGLIELGVQPEQRVALASSTRVEWLLADLGIMCAGAATTTVYPQTNAEESAFILADS
ESRVLIAEDAAQLAKAAARRAELPALTHVVVIDPAGVETGDWVLTLAELEARGAARLEKD
PELIRERVGAITRDQLATLIYTSGTTGRPKGVRLPHDNWSYMAKAIAATGLVGREDVQYL
WLPLAHVFGKVLTSGQIEVGHVTAVDGRVDKIIENLPVVQPTYMAAVPRIFEKVYNGVAA
KAKAGGGAKYKIFQWAAEVAREYAKVSQDNFRRTGTASVPFALGAKHKVADALVFAKIRE
AFGGNLRACVSGSAALAPEIGYFFAGAGIHILEGYGLTESSAASFVNPGEAYRTGTVGKP
LPGTEVRIADDGEILLRSPGIMEGYHGLPEKTAEVLESDGWFHTGDIGELSPDGYLRITD
RKKDLIKTSGGKYIAPAEVEGQFKAVCPYVSNILVHGADRNFCTALIALDEPSILDWAKE
NGLDGKSYAEVVAAPATVALIDGYVTELNQGLQRWQTIKKFRLLPRDLDVEHGEITPSLK
LKRPVVEREYKHLIDEMYAGTREA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacacagacactgatcgagaaccgtccgccgagcgtggcgaccctcttcctg
gaacgcgttgccgccacgccggacgccgaggcgtaccgctacccggtggcatcggcctcc
ggtgcgggccccgaggagtggaagtcgctgagctgggcgcaggccgccgagcgggtccac
gcgatcgcggccggtctgatcgagctgggcgtccagcccgagcagcgcgtcgccctcgcc
tcctcgacccgggtcgagtggctcctcgccgacctcggcatcatgtgcgccggggccgcc
acgaccacggtctacccgcagaccaacgccgaggagtcggcgttcatcctcgccgactcc
gagagccgggtgctgatcgcggaggacgcggcccagctcgccaaggcggccgcccggcgc
gccgagctgcccgccctcacccatgtcgtggtgatcgacccggccggcgtcgagaccggc
gactgggtgctgaccctggccgagctggaggcccgcggcgccgcccgcctggagaaggac
cccgagctgatccgggagcgggtcggcgcgatcacccgggaccagctcgccaccctcatc
tacacctccggcaccacgggccgccccaagggcgtgcgcctgccgcacgacaactggtcg
tacatggcgaaggcgatcgccgcgaccggcctggtcggccgggaggacgtgcagtatctg
tggctgccgctcgcgcacgtcttcggcaaggtgctcacctccggccagatcgaggtcggc
cacgtcaccgccgtcgacggccgcgtcgacaagatcatcgagaatctgccggtcgtgcag
ccgacgtacatggcggccgtcccgcgcatcttcgagaaggtctacaacggggtcgcggcc
aaggcgaaggccggtggcggcgccaagtacaagatcttccagtgggctgccgaggtcgcc
cgcgagtacgccaaggtctcccaggacaacttccggcgcaccggcacggcctccgtcccg
ttcgcgctcggcgccaagcacaaggtcgccgacgcgctcgtcttcgccaagatccgcgag
gcgttcggcggcaacctgcgcgcctgcgtctccggctccgccgcgctcgccccggagatc
ggctacttcttcgccggcgccggcatccacatcctggagggctacggcctcacggaatcc
tcggccgcctccttcgtgaaccccggcgaggcctaccgcaccggcacggtcggcaagccg
ctgcccgggaccgaggtgcgcatcgccgacgacggcgagatcctgctgcgcagccccggc
atcatggagggctaccacgggctgcccgagaagaccgccgaggtgctggagtcggacggc
tggttccacaccggcgacatcggcgagctctccccggacggctatctgcgcatcaccgac
cgcaagaaggacctcatcaagacgtccggcggcaagtacatcgcgccggccgaggtcgag
ggccagttcaaggcggtgtgcccgtacgtctccaacatcctggtgcacggcgccgaccgg
aacttctgcaccgccctcatcgcgctggacgagccgtccatcctcgactgggccaaggag
aacgggctggacggcaagtcgtacgcggaggtcgtcgccgcccccgccacggtcgccctc
atcgacgggtacgtgacggagctcaaccagggcctgcagcgctggcagaccatcaagaag
ttccgcctgctgccgcgcgacctcgacgtggagcacggcgagatcaccccgagcctgaag
ctgaagcgccccgtcgtcgagcgggagtacaagcacctgatcgacgagatgtacgcgggg
acgcgggaggcgtag
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