Streptomyces spinosirectus: LXH13_14095
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Entry
LXH13_14095 CDS
T08958
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00523
Polyketide sugar unit biosynthesis
sspn01100
Metabolic pathways
sspn01110
Biosynthesis of secondary metabolites
sspn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LXH13_14095 (rfbH)
Enzymes [BR:
sspn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
LXH13_14095 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UIR18105
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Position
3052513..3053814
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AA seq
433 aa
AA seq
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MSDTKSQILEQVRDYHLEKEPSRTFVPGVDEIWPSGAVLGPEDRVALVEAALDMKIAAGT
HSRRFESRFARYMKRRKAHLVNSGSSANLLALSALTSPHLEDRRLKPGDEVVTVAAGFPT
TVNPIIQNGLVPVFVDVELKTYNTTAERIKSAIGPKTRAIMIAHALGNPFEVAEVAQIAE
ENDLFLIEDNCDAVGSLYGGRLTGTFGDLTTVSFYPAHHLTMGEGGCVLTANLALARIVE
SMRDWGRDCWCEPGENNRCFKRFEYQLGTLPQGYDHKYIYSHVGYNLKATDLQAALGLTQ
LDKVDEFTAARRHNWSRLREGLDGAPHLILPEATLGSEPSWFGFVITVAPEAPFTRKELV
DHLEKHKIGTRNLFAGNLTRQPAYQDVPHRIVGDLTNSDVITEQTFWIGVYPGLTDEMTD
YMIATIREFVAGR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccaagtcacagatcctggagcaggttcgcgactaccacctggagaaggag
ccgtcgcgcacgttcgtccccggcgtcgacgagatatggccctccggcgcggtcctcggc
cccgaggaccgggtggccctggtcgaggcggccctcgacatgaagatcgcggcgggcacc
cactcccgccgcttcgagtcgcggttcgcccgctacatgaagcgccgcaaggcccacctg
gtgaactccggttcgtcggcgaacctgctcgccctgtccgcgctcacctccccgcacctg
gaggaccgcaggctcaagccgggcgacgaggtcgtcaccgtcgccgccggtttccccacc
accgtcaacccgatcatccagaacggcctggtcccggtcttcgtcgacgtcgagctgaag
acgtacaacaccaccgcggaacgcatcaagtccgcgatcggccccaagacccgcgccatc
atgatcgcccacgcactcggcaaccccttcgaggtcgccgaggtggcgcagatcgccgag
gagaacgacctcttcctgatcgaggacaactgcgacgcggtcggctccctctacggcggc
cgactgaccggcaccttcggcgacttgacgaccgtcagcttctaccccgcgcaccacctc
acgatgggtgagggcggctgcgtgctcaccgcgaacctcgcgctcgcccggatcgtcgag
tcgatgcgggactggggccgcgactgctggtgcgagccgggcgagaacaaccgctgcttc
aagcggttcgagtaccagctgggcaccctgccccagggctacgaccacaagtacatctac
tcgcacgtcggttacaacctgaaggccaccgacctgcaggccgcgctcggcctgacccag
ctggacaaggtcgacgagttcaccgcggcccgccggcacaactggtcccggctgcgcgag
ggcctggacggcgcgccgcacctgatcctgccggaggcgacgctgggcagcgagcccagc
tggttcggcttcgtgatcacggtcgcgcccgaagccccgttcacccgcaaggagctggtg
gaccacctggagaagcacaagatcggcacccgcaacctgttcgccggcaacctgacccgc
cagcccgcctaccaggacgtgccgcaccgcatcgtcggcgacctcaccaactccgacgtc
atcaccgagcagaccttctggatcggcgtctaccccggcctgaccgacgagatgaccgac
tacatgatcgccacgatccgcgagttcgtcgcgggccggtga
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