Streptomyces spinosirectus: LXH13_14120
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Entry
LXH13_14120 CDS
T08958
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03030
DNA replication
sspn03430
Mismatch repair
sspn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LXH13_14120 (holA)
03430 Mismatch repair
LXH13_14120 (holA)
03440 Homologous recombination
LXH13_14120 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_14120 (holA)
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_14120 (holA)
Enzymes [BR:
sspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LXH13_14120 (holA)
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LXH13_14120 (holA)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LXH13_14120 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UIR18110
LinkDB
All DBs
Position
complement(3058250..3059233)
Genome browser
AA seq
327 aa
AA seq
DB search
MARKTSNDDPLAPVTLAVGQEELLLDRAVREVVAAARAADADTDVRDLASDQLQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVKAYLGAPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRGEFRAAGRSATAEACQALVDSIGSDLRELASAVSQLV
ADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWALSTGVAPVLITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVSVALRAVADADAG
VKGGGDDPEYALEKAVVTIARAARSRR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacttcgaatgacgatcctctcgccccggtgacgcttgccgtgggccag
gaggagcttctgcttgatcgtgctgtgcgggaggtggtggctgctgcccgggctgccgac
gccgacacggatgtgcgggacctggcttcggaccagttgcagcccggcacgctcgccgag
ctgaccagtccctcgctcttcgccgagcgcaaggtcgtggtcgtgcgcaacgcgcaggat
ctctcggccgacacggtcaaggacgtgaaggcgtatctcggggcgcccgccgaggagatc
accctcgtgctgctgcacgcgggcggagccaagggcaaggggctgctcgacgccgcccgc
aaggccggtgcgcgggaggtggcctgtccgaagatgaccaagccggccgaccggctggcc
ttcgtgcgcggtgagttcagggcggccgggcggtcggcaacggccgaggcctgccaggca
ctcgtcgactccatcgggagcgatctgcgggagcttgcgtccgccgtctcgcagctggtc
gccgacgtggaggggaccatcgacgaggcggtcgtcgggcggtactacaccgggcgggcc
gaggcctccagcttcaccgtcgccgaccgggccgtggaagggcgggcggccgaggcactg
gaggccctgcgctgggccctgtcgaccggcgtcgcgcccgtgctgatcaccagtgcgctc
gcgcagggtgtgcgggcgatcggcaagctctcgtccgcgcgcggcgggcgcccggccgat
ctggcgcgggagctgggcatgcccccgtggaagatcgaccgggtgcgccagcagatgcgg
ggctggacaccggacggagtgtcggtcgcgctgcgcgcggtggccgacgccgacgccggg
gtgaagggcggcggggacgatcccgagtacgccctggagaaggcggtcgtcacgatcgcc
cgcgccgcacgcagccggcgttag
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