Streptomyces spinosirectus: LXH13_15280
Help
Entry
LXH13_15280 CDS
T08958
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LXH13_15280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_15280
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LXH13_15280
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LXH13_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
NPHP3_N
AAA_16
PhoH
TraI_hel_assoc_N
TrwB_AAD_bind
nSTAND3
AAA
DEAD
UvrD-helicase
UvrD_C
HTH_IclR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UIR18321
LinkDB
All DBs
Position
complement(3320852..3323110)
Genome browser
AA seq
752 aa
AA seq
DB search
MAQQTGDPTGERRLAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGSLLGAQVG
ESLRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
LDTLQIIEEEPKRLIEVSGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKNQPYRLASDVWGIGFLTADRIAQSVGIPHDSPERVKAGLQYALSQATDQ
GNCYLPEEQLIADAVKLLQVDTGLVIECLAELAAEPEEGEDPGVVREKVPGPDGGDPVTA
VYLVPFHRAELSLSAQLLRLLRTDEDRMPGFRDVAWDKALGWLKGRTGADLAPEQEAAVK
LALTQKVAVLTGGPGCGKSFTVRSVVELARAKKARVVLAAPTGRAAKRLSELTGAEASTV
HRLLELKPGGDAAYDKDRPLQADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQL
PSVGAGEVLRDLLADGGPIPAVRLTRVFRQAQQSGVVTNAHRINSGQHPVTDGMKDFFLF
VEDDTEEAGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPGR
PDLPEKRFGGRVFRVGDKVTQIRNNYEKGKNGVFNGTVGVVTSLDPVDQRLTVLTDEDEE
VPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVL
VGSRKAIGQAVRTVSAGRRCTALDFRLSPRLL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggctcagcagacgggggaccccacgggcgaacggcgcctcgccgtgctggagggcgtc
ctggagcgcatcacgtacgccaacgaggagaacggctacacggtcgcgcgggtcgacacc
ggccgcggcggcggcgacctgctcaccgtcgtcggctcgctgctcggcgcccaggtcggc
gagtccctgcggatggagggccgttggggctcccacccgcagtacggcaagcagttcacg
gtggagaactacacgacggtgttgccggccacggtccagggcatccgccgctatctcggc
tccggcctggtcaagggcatcggcccggtcttcgccgaccgcatcacccagcacttcggc
ctggacaccctgcagatcatcgaggaggagcccaagcgcctgatcgaggtctccgggctc
ggccccaagcgcaccaagaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctgcagaccgtcgaggtctccacctccatcgccgtgcgcatctacaag
aagtacggcgacgcctcgatctccgtggtcaagaaccagccctaccgcctcgcgtccgac
gtctggggcatcggcttcctcaccgccgaccggatcgcccagtccgtcggcatcccgcac
gacagccccgagcgcgtgaaggccggcctgcagtacgcgctctcgcaggccaccgaccag
ggcaactgctatctgcccgaggagcagttgatcgccgacgcggtcaagctgctccaggtc
gacaccggcctggtcatcgaatgcctcgccgagctcgccgccgagccggaggagggcgag
gaccccggggtcgtacgggagaaggtgccgggcccggacggcggcgacccggtgacggcc
gtctacctcgtccccttccaccgcgccgaactgtccctgtccgcccagttgttgcgcctg
ctgcgcaccgacgaggaccgtatgccgggctttcgcgacgtggcctgggacaaggcgctg
ggctggctgaaggggcgcacgggcgcggacctcgcgcccgagcaggaggccgccgtcaag
ctggcgctgacccagaaggtcgccgtgctgaccggcggaccgggctgcggcaagtccttc
accgtccgctcggtggtggagctggcccgcgccaagaaggcgagggtggtcctggcggcc
cccaccggccgcgccgccaagcggctgtccgagctcaccggcgccgaggcctccaccgtg
caccgcctgctggagctcaagcccggcggcgacgcggcgtacgacaaggaccgtcccctg
caggccgacctggtggtggtcgacgaggcgtccatgctggacctgctgctcgccaacaag
ctggtcaaggcggtcccgccgggtgcccatctgctcttcgtcggggacgtggaccagctg
ccgagcgtcggcgcgggggaggtgctcagggacctcctcgcggacggcggcccaatcccg
gcggtgcgcctgacgcgggtgttccgccaggcccagcagtccggggtggtgaccaacgcg
caccggatcaactccgggcagcatccggtcacggacggcatgaaggacttcttcctcttc
gtcgaggacgacaccgaggaggccgggcggctcaccgtggacgtggccgcccgccgcatc
ccggccaggttcggcctcgacccgcgccgggacgtgcaggtcctcgccccgatgcaccgc
ggcccggccggcgccggcacgctcaacggcctgctgcagcaggcgatcaccccgggccgg
cccgacctgcccgagaagagattcggcggccgggtcttccgggtcggcgacaaggtcacc
cagattcgcaacaattacgagaagggcaagaacggtgtcttcaacggcaccgtgggcgtg
gtcacctcgctcgacccggtcgaccagcgcctgacggtgctgaccgacgaggacgaggag
gttccgtacgaattcgacgaactggacgaactggctcacgcgtacgcggtgaccattcac
cgctcgcaggggagtgaatacccggccgtggtgatcccggtcaccacgggcgcctggatg
atgctccagcgcaacctcctctacacggcggtcacacgggccaagaagctggtcgtcctc
gtcggttcacgcaaggcgatcggccaggcggtgcgcacggtgtcggcgggacggcgctgt
acggcactcgacttcaggctttccccccggctcctgtga
DBGET
integrated database retrieval system
