Streptomyces spinosirectus: LXH13_15565
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Entry
LXH13_15565 CDS
T08958
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LXH13_15565 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspn03019
]
LXH13_15565 (orn)
03009 Ribosome biogenesis [BR:
sspn03009
]
LXH13_15565 (orn)
Messenger RNA biogenesis [BR:
sspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LXH13_15565 (orn)
Ribosome biogenesis [BR:
sspn03009
]
Eukaryotic type
Pre-60S particles
RNases
LXH13_15565 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UIR18376
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All DBs
Position
3390062..3390664
Genome browser
AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNILGEGVDIVIRPPDQALETMPEVVR
QMHTASGLLEELAGGTTLADAEEQVLSYVREHVKEAGKAPLCGNSVGTDRGFLLRDMATL
EGYLHYRIVDVSSVKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTARSIAAKHVLPAR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gcgctcatcgaggttgccgccctcgtcaccgactccgaactgaacatcctcggcgagggt
gtggacatcgtcatccgtccgccggaccaggccctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccggactgctggaggagctggccgggggcacgaccctggccgac
gccgaggagcaggtcctctcctacgtccgcgagcacgtcaaggaggccgggaaggctccg
ctgtgcggcaactccgtcggcacggaccgcggcttcctgctcagggacatggcgacgctt
gagggctacctccactaccgcatcgtcgacgtcagctccgtcaaggaactcgcccggcgc
tggtacccgcgggcctacttcaacagccccgagaagaacggcaaccaccgcgccctcgcc
gacatccgcgagtccatcgcggagctgcgctactaccgcgaggcgatcttcgtcccgcag
cccggccccgactccgacacggccaggtcgatcgcggcgaagcacgtcctgcccgcgcgg
tag
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