Streptomyces spinosirectus: LXH13_16650
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Entry
LXH13_16650 CDS
T08958
Name
(GenBank) DUF5136 domain-containing protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00550
Peptidoglycan biosynthesis
sspn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LXH13_16650
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspn01002
]
LXH13_16650
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sspn01011
]
LXH13_16650
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LXH13_16650
Peptidases and inhibitors [BR:
sspn01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LXH13_16650
Peptidoglycan biosynthesis and degradation proteins [BR:
sspn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LXH13_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Peptidase_S13
Beta-lactamase2
Phage_holin_2_4
Motif
Other DBs
NCBI-ProteinID:
UIR18575
LinkDB
All DBs
Position
3623732..3625165
Genome browser
AA seq
477 aa
AA seq
DB search
MIQLHTPKASRNQETGRLSFMRPVSPPPVPYGGRGGVGGGTSRRTACTFPSVPAPKKTVR
RSLLVTSAALSSLALAAPVALAAPHPSTSPSATPPAKMSSVGGARLGQPGTQVDLGSGAP
VLPKGLTARSWIVSDAESGEVLAAHNAHWRLPPASTMKMLFADTVLPKFPSTEKHKVVPS
DLAGMGVGSSMVGIKEGESYTVHDLWLGVFLRSGNDAVHVLSAMNDGVGNTVKEMNEHAE
ELQALDTHVVTPDGYDAPKQVSSAYDLSLFARSGLQKKDFREYCSTVRAQFPGETKKAKK
GKNAGKPVRGSFEIQNTNRLLSGDYDTPVYQGIAGVKNGNTTNAGATFTGVAERNGRVLL
VTVMHPEKADHNEVYKEAAKLLDWGFKASGKAKPVGALVAPRSAQPSARPEASGQAGGAA
GDASAKPVASDAARGGSGGMGVALAIAGGVLVLLAAATFLVNRRWPLPDLVRRRTRP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatccagctccacaccccgaaggcgagcaggaaccaggagacggggcgactgagcttc
atgcgtccagtatcgccgccccctgtgccgtacggcggccggggtggggtgggaggcggg
acttcacggcgtactgcatgtacgtttccgtccgtgcccgctcccaagaagaccgtcagg
cgatccctgctggtcacctccgcagccctgtcctcgctggctcttgccgcgccggtcgcc
ctcgcggctccgcacccgtccacgagtccgtcggccactcccccggcgaagatgtcgagc
gtgggcggtgcccgtctcgggcagccgggcacgcaggtggatctcggcagcggcgcccct
gtgctccccaagggcctcaccgcccgctcctggatcgtctcggacgccgagtcgggcgag
gtgctcgccgcgcacaacgcgcactggcggctgcctccggcgagcacgatgaagatgctg
ttcgcggacacggtgctgccgaagttcccgagcaccgagaagcacaaggtcgtcccctcc
gacctggccggcatgggcgtcggctccagcatggtcgggataaaggagggcgagtcctac
acggtccacgacctgtggctcggtgtcttcctgcgctccggcaacgacgccgtgcatgtg
ctgtcggccatgaacgacggcgtcggcaacaccgtcaaggagatgaacgagcacgccgag
gagctccaggccctcgacacgcacgtggtcacacccgacggctacgacgcccccaagcag
gtctcctcggcgtacgacctgtcgctgttcgcccgctccgggctgcagaagaaggacttc
cgcgagtactgctcgaccgtgcgcgcccagttcccgggcgagacgaagaaggccaagaag
ggcaagaacgcgggcaagccggtccgcgggtccttcgagatccagaacaccaaccggctg
ctgagcggcgactacgacacccccgtctaccagggcatcgcgggcgtcaagaacggcaac
acgacgaacgcgggcgcgaccttcacgggcgtcgccgagcggaacggccgggtgctgctg
gtcaccgtcatgcacccggagaaggccgaccacaacgaggtctacaaggaggccgccaag
ctcctcgactggggcttcaaggcatccggcaaggcgaagccggtgggcgcgctggtggcg
ccgaggagcgcgcagcccagcgcccgaccggaggcgtcgggccaggcgggcggggcggcc
ggtgacgcgtccgccaagccggtggcgagcgacgccgccaggggcggctccggcggcatg
ggggtcgcactggccatagcgggtggcgtgctggtgctgctggccgcggccacgttcctg
gtcaaccgccgctggccgctgcccgatctggtacgtcgccggactcgtccgtga
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