Streptomyces spinosirectus: LXH13_16915
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Entry
LXH13_16915 CDS
T08958
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03420
Nucleotide excision repair
sspn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LXH13_16915 (pcrA)
03430 Mismatch repair
LXH13_16915 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_16915 (pcrA)
Enzymes [BR:
sspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LXH13_16915 (pcrA)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXH13_16915 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LXH13_16915 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
UIR18623
LinkDB
All DBs
Position
complement(3683957..3686443)
Genome browser
AA seq
828 aa
AA seq
DB search
MSSLFDDSFLADLKAPRGHDEEPPPPPEDDHVPEPVPDDLFGGKFDVPPDRDTHYRDGAP
RPVIDPAALLDGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERSVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRYPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTAQHDEDVPPSEHDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILTAANAVIERNESRRPKNLWTNAGAGARITGYVADTEHDEAQFVADEIDRLT
DAGDAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGERAEAMIDALAQREKISFPQALRRVDEAYGMAARSANAVRK
FNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQESGEGEEPAGLADFLERVALVADSDQIPDEEEDGSGVITLMTLHTAKGLEFPVVFLTG
MEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSLRSAWGQPSYNPPSRFLE
EIPAQHVDWKRKGATAPVPSGPASGVAASLSSSRSRSSASGASGFATSRASDKPVVSLAV
GDRVTHDQFGLGTVVAVKGTGGNAEATIDFGDDKPKRLLLRYAPVEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcaaggcaccccgtggccatgac
gaggagcccccgccgccgcccgaggacgatcacgtaccggagccggttccggacgatctg
ttcggtgggaagttcgacgtgcccccggaccgggacacccactaccgcgacggtgccccg
cgcccggtgatcgacccggccgccctgctggacgggctgaacgagaaccagcgcgcggcc
gtcgtccactccggcagccccctgctcatcgtggccggcgccggctccggcaagacccgc
gtcctcacgcaccgcatcgcgcacctgctcgccgagcggagcgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggagagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgaccttccacagcgcgtgcgtacgcatc
ctgcgccgcgagtccaagaagctcggcttcacgtcgtcgttctcgatctacgacgccgcc
gactccaagcgcctgatggccctggtctgccgtgacctggacctcgaccccaagcgctac
ccgccgaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcgcaggccaccgacggcttcgagaagaccctcgcccaggcctacgccatg
taccagtcgcggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgacgacg
gtcaatctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgcactcgtacgagaactg
gtcggcaccgcgcagcacgacgaggacgtaccgcccagcgagcacgacctcccgcccgcc
gagctgtgcgtcgtcggtgacgcggaccagtcgatctacgccttccgcggcgcgacgatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacgcagaccatcctcaccgccgccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaacgcgggcgcgggcgcgcgcatcaccggctat
gtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgcctcacg
gacgcgggcgacgccaaggccggcgacgtcgcggtcttctaccgcaccaacgcacagtcc
cgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtgctggccaac
cccgaggactcggtcccgctgcgccggatcctgaacgtccccaagcgcggcatcggcgag
cgcgccgaggcgatgatcgacgccctcgcccagcgggagaagatcagcttcccgcaggcg
ctgcgccgcgtcgacgaggcgtacggcatggccgcgcgctccgccaacgccgtaaggaag
ttcaacacgctgatggaggacctccgtacgatcgtcgagtccggcgcaggaccggcgacg
gtcctggaggcgatcctcgaacggaccggttatcttgccgagttgcaggcctccaccgac
ccgcaggacgagacccgcatcgagaacctccaggaactcgccgctgtggctctggagttc
gagcaggagtccggcgagggcgaggagcccgcggggctcgccgacttcctggagcgggtc
gcgctggtcgccgactccgaccagatcccggacgaggaggaggacggctccggcgtcatc
accctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctgaccggc
atggaggacggcgtcttcccgcacatgcgcgccctcggccagaccaaggagctggaggag
gagcggcggctcgcctacgtcggcatcacgcgcgcgcgtgaacggctgtatctgacgcgg
tcgtcgctgcgcagcgcctggggccagccctcgtacaacccgccctcccgcttcctggag
gagatccccgcccagcacgtcgactggaagcgcaagggcgccacggcacccgtcccgtcc
ggcccggcgtccggtgtggccgcctcgctgtcgtcctcccgctcgcgctcctcggcgtcg
ggcgcgtccgggttcgccaccagccgcgcctccgacaagccggtggtctcgctggccgtc
ggcgaccgggtcacccacgaccagttcgggctcggcacggtcgtcgcggtgaagggcacg
ggcggcaacgcggaggcgacgatcgacttcggcgacgacaagccgaagcggctgctgctg
cggtacgcgccggtggagaagctgtag
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