Streptomyces spinosirectus: LXH13_17105
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Entry
LXH13_17105 CDS
T08958
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LXH13_17105 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspn03019
]
LXH13_17105 (groL)
03110 Chaperones and folding catalysts [BR:
sspn03110
]
LXH13_17105 (groL)
03029 Mitochondrial biogenesis [BR:
sspn03029
]
LXH13_17105 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspn04147
]
LXH13_17105 (groL)
Enzymes [BR:
sspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LXH13_17105 (groL)
Messenger RNA biogenesis [BR:
sspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LXH13_17105 (groL)
Chaperones and folding catalysts [BR:
sspn03110
]
Heat shock proteins
HSP60 / Chaperonin
LXH13_17105 (groL)
Mitochondrial biogenesis [BR:
sspn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LXH13_17105 (groL)
Exosome [BR:
sspn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LXH13_17105 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LXH13_17105 (groL)
Exosomal proteins of breast cancer cells
LXH13_17105 (groL)
Exosomal proteins of colorectal cancer cells
LXH13_17105 (groL)
Exosomal proteins of bladder cancer cells
LXH13_17105 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UIR18659
LinkDB
All DBs
Position
complement(3733636..3735261)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPALLKKGID
AAVAAVSEELLASARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILINQGKIGSIADLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATV
ISEEVGLKLDQVGLDVLGSARRITVTKDDTTIVDGAGNSADVQGRIAQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLADNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAAGAGHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtgatcgac
aagaagttcggcgcgcccaccatcaccaacgacggcgtcaccatcgcccgtgaggtcgag
gtcgaggacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctggtgcgc
gagggcctgcgcaacgtcgccgcgggtgcctccccggcgctgctgaagaagggcatcgac
gcggccgtggccgccgtctccgaggaactcctcgcgagcgcccggccgatcgacgagaag
tccgacatcgccgccgtggccgcgctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtcttgagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtcacggaccaggagcgcatggaggccgtcctcgaggacccctacatcctcatc
aaccagggcaagatcggctccatcgccgacctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctctcc
accctggtcgtcaacaagatccgcggcaccttcaacgccgtcgcggtgaaggcccccggc
ttcggcgaccgccgcaaggcgatgctgcaggacatggcgaccctcaccggcgccacggtc
atctccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctgggctccgcc
cgccgcatcacggtcaccaaggacgacacgaccatcgtggacggcgcgggcaactccgcc
gacgtccagggccgtatcgcccagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggtgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgctctggtg
cacgccgtgaaggtgctcgcggacaacctcggcaagaccggcgacgaggccacgggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctggacaagggccagggcttcaacgcc
gccaccggtgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctcctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggaggagccggccgccgcgggcgccggtcacggccacgcc
cactga
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