Streptomyces spinosirectus: LXH13_17820
Help
Entry
LXH13_17820 CDS
T08958
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LXH13_17820 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspn03019
]
LXH13_17820 (recQ)
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_17820 (recQ)
Enzymes [BR:
sspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LXH13_17820 (recQ)
Messenger RNA biogenesis [BR:
sspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LXH13_17820 (recQ)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LXH13_17820 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UIR22950
LinkDB
All DBs
Position
complement(3867759..3869768)
Genome browser
AA seq
669 aa
AA seq
DB search
MGGTGGISEMPGATDSEALATLHRVFGYETFRGEQEAVIDHVVAGGDAVVLMPTGGGKSL
CYQIPALVRPGTGIVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRVVEAEFLAGE
LDLLYLAPERLRLDSTLDLLSRGKISLFAIDEAHCVSQWGHDFRPDYLTLSLLGERWPDV
PRVALTATATHATHQEITQRLNMPAARHFVASFDRPNIQYRIVPKADPKKQLLTFLREEH
QGDAGIVYCLSRKSVEATAEFLSRNGIEAVPYHAGLDAGTRAAHQSRFLREEGLVVVATI
AFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKLIQT
GEGDEAFRRRAAAHLDSMLALCETVQCRRAQLLAYFGQDPDPTGCGNCDTCLTTPETWDG
TVAAQKVLSTVVRLQRERGQKFGAVQIVDILLGRRTAKVIQFDHDQLSVFGIGEELTEGE
WRGTVRQLLAQGLLAVEGEYGTLVLTEASGSVLRREREVPLRKEPKKPATSRSSSSGKGD
RKAKAAVAELPESLQPAFEALRAWRAEQAREQGVPAYVIFHDATLREIATIWPRSVRELG
GIAGVGEKKLATYGEGVLAVLAELGGPNETVSGAAPEAVTAAEPAADAAAGGDDHWPEMD
GEPEPEDWI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggacgggcggtatcagcgagatgccaggggcgacagacagcgaggcgttggcc
acgctgcaccgggtcttcggctacgagaccttccgcggcgagcaggaagcggtcatcgac
catgtggtggccggcggcgacgccgtggtgctcatgccgaccggcggcggaaagtcgctg
tgctaccagatcccggccctggtcagacccggtacgggcatcgtggtctccccgctcatc
gcgctgatgcaggaccaggtggacgcgctgcgggcgctcggcgtgcgggccgggttcatg
aactccacgcaggacttcgacgaacgacgggtggtggaggccgagttcctcgccggtgag
ctggatctgctgtatctggcgccggagcggctccggctcgactcgacgctcgatctgctc
tcccgcggcaagatctcgctcttcgcgatcgacgaggcgcactgtgtctcccagtggggc
cacgacttccggcccgactatctcaccctgtccctgctcggtgagcgctggccggacgtc
ccccgggtcgcgctcacggccacggccacgcatgcgacgcaccaggagatcacccagcgc
ctgaacatgccggcggcccggcacttcgtggcgagcttcgaccgccccaacatccagtac
cgcatcgtgcccaaggccgaccccaagaagcagctgctgaccttcctgcgcgaggagcac
cagggcgacgcgggcatcgtgtactgcctctcgcgcaagtccgtcgaggcgacggccgag
ttcctcagccgcaacggcatcgaggccgtgccgtaccacgcgggcctggacgcgggcact
cgcgcggcgcaccagtcccgcttcctgcgcgaggagggcctggtcgtggtcgcgaccatc
gccttcggcatgggcatcgacaaaccggacgtgcgcttcgtcgcccacctcgacctgccg
aagtcggtcgagggctactaccaggagacgggccgcgcggggcgcgacggactgccctcc
acggcatggatggcctacggcctcaacgacgtcatacagcagcgcaagctgatccagacc
ggcgagggggacgaggcgttccggcgccgggccgccgcccacctggactcgatgctggca
ctctgcgagacggtccagtgccgccgcgcccagcttctcgcctacttcggccaggacccc
gatcccaccggctgcggcaactgcgacacctgcctgaccacaccggagacctgggacggc
acggtcgccgcacagaaggtgctgtcgacggtggtgcggctgcagcgggagcggggacag
aagttcggcgcggtgcagatcgtcgacatcctgctggggcggcgcacggccaaggtgatc
cagttcgatcacgaccagctgtccgtgttcggtatcggcgaggagctcaccgagggcgaa
tggcggggcaccgtacggcagttgctggcccaggggctgctcgcggtcgagggggagtac
ggcacgctggtgctgaccgaggcgagcggatcggtgctgcggcgcgagcgggaggtgccg
ctgcgcaaggaaccgaagaaaccggcgacctcgcgctcgtcctcctcgggcaagggagac
cgcaaggccaaggccgccgtggccgagctgcccgagtcgctgcagcccgccttcgaggcc
ctgcgcgcctggcgcgcggaacaggcccgcgaacagggcgtcccggcctacgtcatcttc
cacgacgccacactccgcgaaatcgccaccatctggccgaggtcggtgcgcgaactcggg
gggatcgccggggtgggggagaagaagctggcgacgtacggggagggggtgctggcggtg
ctggctgagctgggcgggccgaatgaaacggtttccggggcggccccggaggcggtcaca
gcggctgagcccgctgcggatgcggcggcgggcggcgacgaccactggcccgagatggac
ggggagccggagccggaggactggatatag
DBGET
integrated database retrieval system
