Streptomyces spinosirectus: LXH13_18235
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Entry
LXH13_18235 CDS
T08958
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00061
Fatty acid biosynthesis
sspn00071
Fatty acid degradation
sspn01100
Metabolic pathways
sspn01212
Fatty acid metabolism
sspn02024
Quorum sensing
sspn04146
Peroxisome
Module
sspn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LXH13_18235
00071 Fatty acid degradation
LXH13_18235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LXH13_18235
09145 Cellular community - prokaryotes
02024 Quorum sensing
LXH13_18235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sspn01004
]
LXH13_18235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspn04147
]
LXH13_18235
Enzymes [BR:
sspn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LXH13_18235
Lipid biosynthesis proteins [BR:
sspn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LXH13_18235
Exosome [BR:
sspn04147
]
Exosomal proteins
Exosomal proteins of breast milk
LXH13_18235
Exosomal proteins of breast cancer cells
LXH13_18235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UIR18869
LinkDB
All DBs
Position
complement(3953661..3955592)
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AA seq
643 aa
AA seq
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MSTSRPSADVAVHATALDGTPVLVEPVIQRLGGEVREAYVPPFVPPVRHGSLADLPFDNA
RTAPDDQVLSRRTDTGRWEHVTAVEFADEVLAAAKGLIAEGLNPGDRIAVMARTVYEWTL
LDFAAWACGLVTVPIYPTSSAFQTRWILQDSGAVALVTETAAQAAALGPELDRVPDLRHL
WVIEKGHVERLAERGGRIRDQEVEVRRGMLGPDTLATIVYTSGTTGRPKGCAITHGNFFA
EVDNAIELLYPVFRERTSEEAAVLHFLPMSHIFGRMVAVACIRARVRLGHAPSLKPEELL
PALASFRPTCLIAIPYMLEKVFNAARAKAETGGRAGTFDRAVGVAVRHGEAVEARHAGTG
SGPRTVLKAARAIYDPLVYRRIRNAMGGRVRYMISGGSPLGRRLAAFYAGAGIEIYEGYG
LTETTGASTVTPPLKPRLGSVGWPLPGTKVRIAADGEVLLSGGHVLRGYWDPNAGGVTPA
TVDGWLATGDLGRLDEEGYLYITGRKKEMLITAGGKSVAPAPLENWLRAHPLISQVMVVG
DARPYVAALITLDTDGVTHWRRMHGKHPVPVQLLLDDEELRAVLQRAVDEANKLVSRPES
IRRFTILPTDLTEESGHLTPSLKLKRDAITRDFAAHIEQLYSF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacctcgcgcccgtccgccgacgtcgcggttcacgccacggcgctcgacggcacg
ccggtcctcgtggagcccgtgatccagcggctgggcggggaggtgcgcgaggcctacgtg
ccgcccttcgtcccgccggtgcggcacggctccctcgccgacctgcccttcgacaacgcg
cgcaccgcccccgacgaccaggtcctcagccgccgcaccgacaccggccggtgggagcac
gtcaccgcggtcgagttcgccgacgaggtactggcggcggcgaagggactgatcgccgag
ggactcaacccgggggaccggatcgcggtcatggcgcggaccgtctacgagtggacgctc
ctggacttcgccgcctgggcctgcggcctggtcaccgtcccgatctaccccacctcctcc
gccttccagacccgttggatcctccaggactccggcgccgtcgcactcgtcaccgagacc
gcggcgcaggcggccgcgctgggccccgaactcgaccgggtgcccgacctgcggcatctg
tgggtcatcgagaagggccatgtggagcgcctggccgagcgcggcgggcgcatacgggac
caggaggtggaggtgcggcgcgggatgctgggccccgacaccctcgccaccatcgtctac
acctcgggcaccaccggccgccccaagggctgcgcgatcacccacggcaacttcttcgcc
gaggtcgacaacgcgatcgaactcctctacccggtgttccgggagcggaccagcgaagag
gccgcggtcctgcacttcctgccgatgtcacacatcttcggccgcatggtggcggtcgcc
tgcatccgcgcacgggtccggctcggacacgcccccagcctgaagccggaggaactgctg
cccgccctggccagcttccggccgacctgtctcatcgccatcccgtacatgctggagaag
gtgttcaacgccgcccgcgcgaaggccgagaccggcggccgggccggcaccttcgaccgc
gcggtgggcgtggccgtgcgccacggggaggcggtcgaggcccggcacgccggcaccggc
tcgggcccgcgcaccgtcctcaaggcggcccgcgccatctacgaccccctggtctaccgc
cgcatccgcaacgcgatgggcggcagggtccgctacatgatctccggcggctcccccctc
ggccgccgcctcgccgcgttctacgccggggcgggcatcgagatctacgagggctacggc
ctcacggagaccaccggtgcctccaccgtgacccctcccctcaaaccccgcctcggctcg
gtcggttggccgctgcccggcaccaaggtccggatcgcggccgacggcgaggtcctgctg
agcggcggccatgtgctgcgcggctactgggacccgaacgccggcggggtgacccccgcg
accgtcgacggctggctcgccaccggcgacctcggccggctcgacgaggagggctacctc
tacatcaccggccgcaagaaggagatgctgatcacggcgggcggcaagagcgtcgccccg
gccccgctggagaactggctgcgcgcccaccccctgatctcccaggtcatggtcgtcggc
gacgcccgcccctacgtcgccgccctcatcaccctcgacacggacggcgtcacccactgg
cgccgcatgcacggcaaacacccggtcccggtgcaactcctcctcgacgacgaggagttg
agggcagtcctgcaacgcgccgtggacgaggccaacaaactggtctcccgccccgaatcc
atccgccgcttcaccatcctccccaccgacctgacagaggaatcgggccacctcaccccg
tccctgaaactcaaaagagacgcaatcaccagggatttcgccgcacatatcgagcagctc
tacagcttttag
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