Streptomyces spinosirectus: LXH13_21165
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Entry
LXH13_21165 CDS
T08958
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspn03021
]
LXH13_21165
Transcription machinery [BR:
sspn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LXH13_21165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
DUF7343
MarR
Motif
Other DBs
NCBI-ProteinID:
UIR19404
LinkDB
All DBs
Position
complement(4576308..4577198)
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AA seq
296 aa
AA seq
DB search
MSADQGSSKVLTLAKSESAPADAVFVEAPVLEAPQAPALPSPENIDTRTLSRSLFLRLAA
LDEHSPERVYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERG
VEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVPELA
AVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLK
PLLAKLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacactcgcgaagagcgagtccgcaccc
gctgacgccgtgttcgtcgaggctccggtgctggaggccccccaggccccggctcttccg
agtccggagaacatcgacacccgcaccctgtcccgctcccttttcctgcggctcgccgca
ctcgacgagcacagccccgagcgtgtgtacgtgcgggacaccctcatcgaactcaacctc
cccctggtgcgctacgccgcggcccggttccgctcgcgcaacgaaccgatggaggacatc
gtccaggtcggcaccatcggcctgatcaaggcgatcgaccggttcgactgcgaacggggc
gtggagttcccgacgttcgcgatgccgaccgtcgtcggcgagatcaagcggttcttccgc
gacacctcgtggtcggtgcgcgtgccgcgccggctgcaggagctgcgcctggccctgacg
aaggccagcgacgagctctcccagaagctcgaccgctcgccgaccgtgcccgaactcgcc
gccgtgctcggcgtctccgaggaggacgtcgtcgacggcctcgcggtcggcaacgcctac
acggcctcctcactggactccccggcccccgaggacgacggcggcgagggctccctcgcg
gaccgcctcggctacgaggacaccgccctggagggcgtcgagtaccgcgagtcgttgaag
ccgctgctggccaagctgccgccccgtgagcggcagatcatcatgctccgcttcttcgcc
aacatgacgcagtcgcagatcggcgaggaggtcggcatctcgcagatgcacgtctcccgc
ctgctgacccgcacgctggcgcagctgcgcgaggggctcatctcggactga
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