Streptomyces spinosirectus: LXH13_21170
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Entry
LXH13_21170 CDS
T08958
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspn03021
]
LXH13_21170
Transcription machinery [BR:
sspn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LXH13_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
NirdL-like_HTH
MarR
HTH_3
DUF7343
DUF134
HTH_37
Motif
Other DBs
NCBI-ProteinID:
UIR19405
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All DBs
Position
complement(4577502..4578341)
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AA seq
279 aa
AA seq
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MPASTAPQAPPQEAAPEPVEAAPPRSRGADTRALTQVLFGELKTLRPGSPEHIRVRGALI
EANLPLVRYAAARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIK
RYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRTPTTAEIAERLRITEEEVLSCIEA
GRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLLVQLPEREQRILLLRY
YSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIEA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtactgcgcctcaagcaccgccccaggaagccgcaccggagccggtggaa
gccgctccgccgcgcagccgcggtgccgacacccgggccctcacacaggtgctcttcggc
gagctcaagacactgcgccccggcagcccggagcacatccgggtgcgcggggcgctgatc
gaggccaacctcccgctcgtgcgctacgccgccgcccgtttccgctcccgcaacgagccg
atggaggacgtgatccaggtcggcacgatcgggctcatcaacgcgatcgaccgcttcgac
ccggaccgcggcgtgcagttccccaccttcgcgatgccgaccgtggtcggcgagatcaag
cggtacttccgcgacaacgtccgcacggtccatgtgccgcgccggctgcacgagctgtgg
gtgcaggtcaacagcgccaccgaggacctgacgaccgccttcgggcgcaccccgacgacc
gccgagatcgccgaacggctgcgcatcaccgaggaggaggtcctctcctgcatcgaggcg
ggccgctcgtaccacgcgacctccctggaggccgcgcaggagggcgacgggctgccgggc
ctgctcgaccggctcggctacgaggacccggcgctggacggcgtcgaacaccgcgacctc
gtccgccatctcctcgtacaactcccggagcgggaacagagaatcctgctgctgcgctac
tacagcaacctcacccagtcgcaaatcagcgcggaactcggcgtctcccagatgcatgtc
tcacggctactcgcgcgtagcttccagcggctgcgatccgctaatcggatcgaggcataa
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