Streptomyces spinosirectus: LXH13_22705
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Entry
LXH13_22705 CDS
T08958
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LXH13_22705 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspn03019
]
LXH13_22705 (groL)
03110 Chaperones and folding catalysts [BR:
sspn03110
]
LXH13_22705 (groL)
03029 Mitochondrial biogenesis [BR:
sspn03029
]
LXH13_22705 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspn04147
]
LXH13_22705 (groL)
Enzymes [BR:
sspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LXH13_22705 (groL)
Messenger RNA biogenesis [BR:
sspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LXH13_22705 (groL)
Chaperones and folding catalysts [BR:
sspn03110
]
Heat shock proteins
HSP60 / Chaperonin
LXH13_22705 (groL)
Mitochondrial biogenesis [BR:
sspn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LXH13_22705 (groL)
Exosome [BR:
sspn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LXH13_22705 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LXH13_22705 (groL)
Exosomal proteins of breast cancer cells
LXH13_22705 (groL)
Exosomal proteins of colorectal cancer cells
LXH13_22705 (groL)
Exosomal proteins of bladder cancer cells
LXH13_22705 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
CRLF3_N
Motif
Other DBs
NCBI-ProteinID:
UIR19674
LinkDB
All DBs
Position
4882381..4884003
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSGALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIANSKIGSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGEVIS
EEVGLKLENTTLDLLGRARKVVITKDETTIVDGAGSTEQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
STVFEKLDLEGDEATGANAVRIALEAPLKQIAVNAGLEGGVVVEKVRNLTPGHGLNAATG
EYVDLVKEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtgaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgttctcgcccaggccctggtcaag
gagggcctgcgcaacgtagccgccggtgccaacccgatggccctcaagcgcggtatcgag
aaggccgtcgaggccgtctccggtgccctgctcgagcaagccaaggacgtggagaccaag
gagcagatcgcttccacggcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagctggagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcggatggaggcgtcgctcgacgacccgtacatcctgatc
gccaactccaagatcggctccgtcaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgcggtcaaggccccgggcttcggc
gaccgccgcaaggcgatgctgaacgacatcgccatcctcaccggcggcgaggtcatctcc
gaggaggtcggtctcaagctggagaacacgaccctcgacctgctgggccgcgcccgcaag
gtggtcatcaccaaggacgagaccaccatcgtcgacggcgccggctccacggagcaggtg
cagggccgcgtgaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtcgcgctcatccaggcg
tccaccgtcttcgagaagctggacctggagggtgacgaggcgaccggcgccaacgccgtg
cgcatcgcgctcgaggccccgctgaagcagatcgccgtcaacgccggcctcgagggcggt
gtcgtggtggagaaggtgcgcaacctgaccccgggccacggcctgaacgccgcgaccggc
gagtacgtcgacctggtcaaggaaggcatcatcgacccggcgaaggtcacgcgctctgcc
ctgcagaacgccgcctccatcgccgcgctcttcctgaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcgcccgccggtggcggcatgccgggcggtgacatggacttc
tga
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